Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.259026	2700078E11Rik	RIKEN cDNA 2700078E11 gene	19		78832
Mm.259026	D130033C15Rik	RIKEN cDNA D130033C15 gene	19		320944
Mm.259026	9830127L17Rik	RIKEN cDNA 9830127L17 gene	19		320443
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 113 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC TGCAGAGAAA (5) 31 0.031 P8 Cb GC GCAAAAAAAA (50) 14.7 0.0147 P8 Cb GC GAGGAGGAGG (35) 1.6 0.0016 P8 Cb GC TGCAGGCTAA (3) 1.6 0.0016 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma GCAAAAAAAA (50) 60.1 0.0601 Cb medulloblastoma TGCAGAGAAA (5) 6.9 0.0069 Cb medulloblastoma TTATTTTTAG (6) 2.3 0.0023 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture TGCAGAGAAA (5) 16 0.016 P8 GC+1d culture GCAAAAAAAA (50) 12.6 0.0126 P8 GC+1d culture TGCAGGCTAA (3) 2.3 0.0023 P8 GC+1d culture TTATTTTTAG (6) 1.1 0.0011 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture GCAAAAAAAA (50) 29.3 0.0293 P8 GC+SHH+1d culture TGCAGAGAAA (5) 18.7 0.0187 P8 GC+SHH+1d culture TTATTTTTAG (6) 3.5 0.0035 P8 GC+SHH+1d culture GCTCTTGGGT (6) 2.3 0.0023 P8 GC+SHH+1d culture GAGGAGGAGG (35) 1.2 0.0012 P8 GC+SHH+1d culture GCAAGGGAAA (5) 1.2 0.0012 P8 GC+SHH+1d culture TGTGGTGTAA (5) 1.2 0.0012 3T3 fibroblasts GAGGAGGAGG (35) 3.5 0.0035 3T3 fibroblasts GCAAAAAAAA (50) 3.5 0.0035 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex GCAAAAAAAA (50) 9.9 0.0099 E15 cortex CTCTGAGAAG (6) 4.9 0.0049 E15 cortex GAGGAGGAGG (35) 4.9 0.0049 E15 cortex TGCAGAGAAA (5) 4.9 0.0049 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex CTCTGAGAAG (6) 9.1 0.0091 P1 cortex TTATTTTTAG (6) 9.1 0.0091 P1 cortex GAGGAGGAGG (35) 4.5 0.0045 P1 cortex GCAAAAAAAA (50) 4.5 0.0045 P1 cortex GCAAGGGAAA (5) 4.5 0.0045 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus TGCAGAGAAA (5) 25.4 0.0254 Hypothalamus GCAAAAAAAA (50) 19.9 0.0199 Hypothalamus GAGGAGGAGG (35) 7.2 0.0072 Hypothalamus CAAAGGGAAA (5) 1.8 0.0018 Hypothalamus TAGAGTGTCC (5) 1.8 0.0018 Hypothalamus TGTGGTGTAA (5) 1.8 0.0018 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina GCAAAAAAAA (50) 9.4 0.0094 E12.5 retina TGCAGAGAAA (5) 9.4 0.0094 E12.5 retina GTGAGCTTGC (3) 5.6 0.0056 E12.5 retina CTCTGAGAAG (6) 1.9 0.0019 E12.5 retina GAGGAGGAGG (35) 1.9 0.0019 E12.5 retina GCAAGGGAAA (5) 1.9 0.0019 E12.5 retina TTATTTTTAG (6) 1.9 0.0019 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina GCAAAAAAAA (50) 12.8 0.0128 E14.5 retina TGCAGAGAAA (5) 9.1 0.0091 E14.5 retina CTGACAACCT (4) 1.8 0.0018 E14.5 retina TGCAGGCTAA (3) 1.8 0.0018 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina GCAAAAAAAA (50) 10.9 0.0109 E16.5 retina TGCAGAGAAA (5) 7.2 0.0072 E16.5 retina GCTCTTGGGT (6) 1.8 0.0018 E16.5 retina TAGAGTGTCC (5) 1.8 0.0018 E16.5 retina TGTGGTGTAA (5) 1.8 0.0018 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina GCAAAAAAAA (50) 25.5 0.0255 E18.5 retina TGCAGAGAAA (5) 16.4 0.0164 E18.5 retina CAAAGGGAAA (5) 1.8 0.0018 E18.5 retina GCAAGGGAAA (5) 1.8 0.0018 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina GCAAAAAAAA (50) 17.7 0.0177 P0.5 retina TAGAGTGTCC (5) 2 0.002 P0.5 retina TGCAGAGAAA (5) 2 0.002 P0.5 retina TTATTTTTAG (6) 2 0.002 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina GCAAAAAAAA (50) 22.9 0.0229 P2.5 retina TGCAGAGAAA (5) 7 0.007 P2.5 retina CTGACAACCT (4) 1.8 0.0018 P2.5 retina GAGGAGGAGG (35) 1.8 0.0018 P2.5 retina GCAAGGGAAA (5) 1.8 0.0018 P2.5 retina TGCAGGCTAA (3) 1.8 0.0018 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina GCAAAAAAAA (50) 25.8 0.0258 P4.5 retina TGCAGAGAAA (5) 9.9 0.0099 P4.5 retina GAGGAGGAGG (35) 2 0.002 P4.5 retina GCAAGGGAAA (5) 2 0.002 P4.5 retina TGCAGGCTAA (3) 2 0.002 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina GCAAAAAAAA (50) 11.7 0.0117 P6.5 retina TGCAGAGAAA (5) 6.7 0.0067 P6.5 retina TTATTTTTAG (6) 5 0.005 P6.5 retina CTCTGAGAAG (6) 1.7 0.0017 P6.5 retina CTGACAACCT (4) 1.7 0.0017 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina GCAAAAAAAA (50) 5.6 0.0056 P10.5 crx- retina CAAAGGGAAA (5) 1.9 0.0019 P10.5 crx- retina GAGGAGGAGG (35) 1.9 0.0019 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina TGCAGAGAAA (5) 7.7 0.0077 P10.5 crx+ retina CTCTGAGAAG (6) 5.8 0.0058 P10.5 crx+ retina GCAAAAAAAA (50) 1.9 0.0019 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal GCAAAAAAAA (50) 11.1 0.0111 Adult retinal TGCAGGCTAA (3) 5.6 0.0056 Adult retinal GAGGAGGAGG (35) 3.7 0.0037 Adult retinal TAGAGTGTCC (5) 1.9 0.0019 Adult retinal TGCAGAGAAA (5) 1.9 0.0019 Adult retinal TTATTTTTAG (6) 1.9 0.0019 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL CTCTGAGAAG (6) 9.6 0.0096 ONL CTGACAACCT (4) 1.9 0.0019 ONL GAGGAGGAGG (35) 1.9 0.0019 ONL GCAAAAAAAA (50) 1.9 0.0019 ONL TAGAGTGTCC (5) 1.9 0.0019 ONL TGCAGAGAAA (5) 1.9 0.0019 ONL TGCAGGCTAA (3) 1.9 0.0019