Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.25903	Nab1	Ngfi-A binding protein 1	1	1 27.0 cM	17936
Gene Ontology	negative regulation of transcription | nucleus | regulation of transcription, DNA-dependent | transcriptional repressor activity
Human Homolog	NAB1[NGFI-A binding protein 1 (EGR1 binding protein 1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACACACACA (106) 11.4 0.0114 P8 Cb GC CCCTGCTGAC (3) 4.9 0.0049 P8 Cb GC AACCGTTTCC 1.6 0.0016 Cb medulloblastoma CACACACACA (106) 32.4 0.0324 Cb medulloblastoma CCCTGCTGAC (3) 11.6 0.0116 Cb medulloblastoma AACCGTTTCC 2.3 0.0023 P8 GC+1d culture CACACACACA (106) 6.8 0.0068 P8 GC+1d culture CCCTGCTGAC (3) 3.4 0.0034 P8 GC+1d culture AAATGAAGAA (4) 1.1 0.0011 P8 GC+1d culture AACCGTTTCC 1.1 0.0011 P8 GC+1d culture GTGTAGAAGC (2) 1.1 0.0011 P8 GC+SHH+1d culture CACACACACA (106) 9.4 0.0094 P8 GC+SHH+1d culture AACCGTTTCC 2.3 0.0023 P8 GC+SHH+1d culture CCCTGCTGAC (3) 2.3 0.0023 3T3 fibroblasts CACACACACA (106) 17.5 0.0175 3T3 fibroblasts AACCGTTTCC 3.5 0.0035 3T3 fibroblasts CCCTGCTGAC (3) 3.5 0.0035 E15 cortex CACACACACA (106) 4.9 0.0049 E15 cortex CCCTGCTGAC (3) 4.9 0.0049 P1 cortex CACACACACA (106) 27.3 0.0273 Hypothalamus CACACACACA (106) 96 0.096 Hypothalamus CCCTGCTGAC (3) 1.8 0.0018 Hypothalamus GTGTAGAAGC (2) 1.8 0.0018 E12.5 retina AACCGTTTCC 5.6 0.0056 E12.5 retina CACACACACA (106) 3.8 0.0038 E12.5 retina CCCTGCTGAC (3) 1.9 0.0019 E14.5 retina CACACACACA (106) 18.2 0.0182 E14.5 retina AACCGTTTCC 3.6 0.0036 E14.5 retina GTGTAGAAGC (2) 1.8 0.0018 E16.5 retina CACACACACA (106) 12.7 0.0127 E16.5 retina AAATGAAGAA (4) 1.8 0.0018 E16.5 retina AACCGTTTCC 1.8 0.0018 E18.5 retina CACACACACA (106) 5.5 0.0055 E18.5 retina AACCGTTTCC 1.8 0.0018 P0.5 retina CACACACACA (106) 7.9 0.0079 P0.5 retina CCCTGCTGAC (3) 3.9 0.0039 P0.5 retina AACCGTTTCC 2 0.002 P2.5 retina CACACACACA (106) 21.1 0.0211 P2.5 retina CCCTGCTGAC (3) 1.8 0.0018 P4.5 retina CACACACACA (106) 7.9 0.0079 P4.5 retina AACCGTTTCC 4 0.004 P4.5 retina CCCTGCTGAC (3) 2 0.002 P6.5 retina CACACACACA (106) 8.3 0.0083 P6.5 retina CCCTGCTGAC (3) 3.3 0.0033 P6.5 retina AAATGAAGAA (4) 1.7 0.0017 P10.5 crx- retina CACACACACA (106) 5.6 0.0056 P10.5 crx+ retina CACACACACA (106) 7.7 0.0077 P10.5 crx+ retina CCCTGCTGAC (3) 3.8 0.0038 Adult retinal CACACACACA (106) 16.7 0.0167 Adult retinal CCCTGCTGAC (3) 9.3 0.0093 ONL CACACACACA (106) 21.1 0.0211 ONL CCCTGCTGAC (3) 5.7 0.0057 ONL AACCGTTTCC 3.8 0.0038 ONL AAATGAAGAA (4) 1.9 0.0019