Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.259197	D030069N10Rik	RIKEN cDNA D030069N10 gene	9		320177
Mm.259197	Rbm5	RNA binding motif protein 5	9		83486
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	RBM5[RNA binding motif protein 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 76 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTTTGAGGC (11) 4.9 0.0049 P8 Cb GC TCTTTGGCAA (3) 4.9 0.0049 P8 Cb GC AAAATGGAAC (4) 3.3 0.0033 P8 Cb GC CTCCGGTGGC (3) 1.6 0.0016 P8 Cb GC GAACGCTGGG (3) 1.6 0.0016 Cb medulloblastoma ACAGCCCTAT (2) 2.3 0.0023 Cb medulloblastoma TAAAACTCAT (2) 2.3 0.0023 Cb medulloblastoma TCTTTGGCAA (3) 2.3 0.0023 Cb medulloblastoma TTGTAGCCTG (2) 2.3 0.0023 P8 GC+1d culture TTGTAGCCTG (2) 4.6 0.0046 P8 GC+1d culture ATCACATTTG (5) 1.1 0.0011 P8 GC+1d culture CAGCAGGCCA (3) 1.1 0.0011 P8 GC+1d culture TCTTTGGCAA (3) 1.1 0.0011 P8 GC+1d culture TGTGTGCAGT (5) 1.1 0.0011 P8 GC+SHH+1d culture TTGTAGCCTG (2) 4.7 0.0047 P8 GC+SHH+1d culture GAACGCTGGG (3) 1.2 0.0012 P8 GC+SHH+1d culture GGCAACCTCC (4) 1.2 0.0012 3T3 fibroblasts CGCGCTGTGA (5) 14 0.014 3T3 fibroblasts AGTTTGAGGC (11) 7 0.007 3T3 fibroblasts GAACGCTGGG (3) 7 0.007 3T3 fibroblasts GTGTCCTTAG (4) 7 0.007 3T3 fibroblasts CTCCGGTGGC (3) 3.5 0.0035 3T3 fibroblasts TCTTTGGCAA (3) 3.5 0.0035 3T3 fibroblasts TGTGTGCAGT (5) 3.5 0.0035 E15 cortex GAACGCTGGG (3) 19.8 0.0198 E15 cortex TTGTAGCCTG (2) 9.9 0.0099 E15 cortex ACAGCCCTAT (2) 4.9 0.0049 E15 cortex AGTTTGAGGC (11) 4.9 0.0049 E15 cortex CTCCGGTGGC (3) 4.9 0.0049 E15 cortex GGCAACCTCC (4) 4.9 0.0049 P1 cortex AAAATGGAAC (4) 4.5 0.0045 Hypothalamus TCTTTGGCAA (3) 1.8 0.0018 Hypothalamus TTGTAGCCTG (2) 1.8 0.0018 E12.5 retina TTGTAGCCTG (2) 5.6 0.0056 E12.5 retina CACCAGGCTG (5) 1.9 0.0019 E12.5 retina CTCCGGTGGC (3) 1.9 0.0019 E14.5 retina TTGTAGCCTG (2) 3.6 0.0036 E14.5 retina AGTTTGAGGC (11) 1.8 0.0018 E14.5 retina CACCAGGCTG (5) 1.8 0.0018 E14.5 retina CCTTGTGCTA (3) 1.8 0.0018 E14.5 retina TCTTTGGCAA (3) 1.8 0.0018 E16.5 retina TTGTAGCCTG (2) 5.4 0.0054 E18.5 retina TTGTAGCCTG (2) 7.3 0.0073 E18.5 retina GATTAAAAAA (6) 1.8 0.0018 P0.5 retina TTGTAGCCTG (2) 3.9 0.0039 P0.5 retina AAAATGGAAC (4) 2 0.002 P0.5 retina ATCACATTTG (5) 2 0.002 P2.5 retina TTGTAGCCTG (2) 8.8 0.0088 P2.5 retina CACCAGGCTG (5) 1.8 0.0018 P2.5 retina GATTAAAAAA (6) 1.8 0.0018 P2.5 retina TAAAACTCAT (2) 1.8 0.0018 P4.5 retina TTGTAGCCTG (2) 7.9 0.0079 P4.5 retina AAAATGGAAC (4) 2 0.002 P4.5 retina ACAGCCCTAT (2) 2 0.002 P4.5 retina CCTTGTGCTA (3) 2 0.002 P4.5 retina GATTAAAAAA (6) 2 0.002 P4.5 retina TAAAACTCAT (2) 2 0.002 P6.5 retina TTGTAGCCTG (2) 6.7 0.0067 P6.5 retina CCTTGTGCTA (3) 3.3 0.0033 P6.5 retina ATCACATTTG (5) 1.7 0.0017 P6.5 retina TCTTTGGCAA (3) 1.7 0.0017 P6.5 retina TGTGTGCAGT (5) 1.7 0.0017 P10.5 crx- retina TTGTAGCCTG (2) 5.6 0.0056 P10.5 crx- retina CCTTGTGCTA (3) 3.7 0.0037 P10.5 crx- retina GGCAACCTCC (4) 1.9 0.0019 P10.5 crx- retina GTGTCCTTAG (4) 1.9 0.0019 P10.5 crx+ retina TTGTAGCCTG (2) 5.8 0.0058 P10.5 crx+ retina AAAATGGAAC (4) 1.9 0.0019 P10.5 crx+ retina AGTTTGAGGC (11) 1.9 0.0019 P10.5 crx+ retina CTCCGGTGGC (3) 1.9 0.0019 Adult retinal AGTTTGAGGC (11) 5.6 0.0056 Adult retinal CAGCAGGCCA (3) 3.7 0.0037 Adult retinal CACCAGGCTG (5) 1.9 0.0019 Adult retinal CTCCGGTGGC (3) 1.9 0.0019 Adult retinal TTGTAGCCTG (2) 1.9 0.0019 ONL TTGTAGCCTG (2) 1.9 0.0019