Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.259688
2610301K12Rik
RIKEN cDNA 2610301K12 gene
2
72477
Mm.259688
2810431I02Rik
RIKEN cDNA 2810431I02 gene
2
72737
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 48 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTGGTTCACA (
32
)
14.7
0.0147
P8 Cb GC
AAAATGACAA (
3
)
1.6
0.0016
Cb medulloblastoma
GTGGTTCACA (
32
)
11.6
0.0116
P8 GC+1d culture
GTGGTTCACA (
32
)
18.3
0.0183
P8 GC+1d culture
AAACTGAGTG (
2
)
1.1
0.0011
P8 GC+1d culture
CAGTAAGCAA
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
GTGGTTCACA (
32
)
31.6
0.0316
P8 GC+SHH+1d culture
AAAATGACAA (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GCCTTCCTCA (
7
)
1.2
0.0012
3T3 fibroblasts
GTGGTTCACA (
32
)
17.5
0.0175
3T3 fibroblasts
AAACTGAGTG (
2
)
3.5
0.0035
E15 cortex
AAACTGAGTG (
2
)
9.9
0.0099
E15 cortex
AAAATGACAA (
3
)
4.9
0.0049
E15 cortex
GTGGTTCACA (
32
)
4.9
0.0049
P1 cortex
GTGGTTCACA (
32
)
27.3
0.0273
P1 cortex
AAAATGACAA (
3
)
4.5
0.0045
Hypothalamus
GTGGTTCACA (
32
)
12.7
0.0127
Hypothalamus
AAAATGACAA (
3
)
1.8
0.0018
Hypothalamus
CAGTAAGCAA
(
4
)
1.8
0.0018
Hypothalamus
GCCTTCCTCA (
7
)
1.8
0.0018
E12.5 retina
GTGGTTCACA (
32
)
28.2
0.0282
E12.5 retina
AAAATGACAA (
3
)
1.9
0.0019
E12.5 retina
AAACTGAGTG (
2
)
1.9
0.0019
E14.5 retina
GTGGTTCACA (
32
)
51
0.051
E16.5 retina
GTGGTTCACA (
32
)
39.8
0.0398
E16.5 retina
AAACTGAGTG (
2
)
1.8
0.0018
E16.5 retina
ATTACGCCAA (
233
)
1.8
0.0018
E18.5 retina
GTGGTTCACA (
32
)
40
0.04
P0.5 retina
GTGGTTCACA (
32
)
35.3
0.0353
P0.5 retina
AAACTGAGTG (
2
)
3.9
0.0039
P0.5 retina
ATTACGCCAA (
233
)
2
0.002
P0.5 retina
CAGTAAGCAA
(
4
)
2
0.002
P2.5 retina
GTGGTTCACA (
32
)
12.3
0.0123
P4.5 retina
GTGGTTCACA (
32
)
33.7
0.0337
P4.5 retina
AAAATGACAA (
3
)
2
0.002
P6.5 retina
GTGGTTCACA (
32
)
25
0.025
P6.5 retina
AAAATGACAA (
3
)
5
0.005
P10.5 crx- retina
GTGGTTCACA (
32
)
20.4
0.0204
P10.5 crx- retina
CAGTAAGCAA
(
4
)
3.7
0.0037
P10.5 crx- retina
AAACTGAGTG (
2
)
1.9
0.0019
P10.5 crx- retina
GCCTTCCTCA (
7
)
1.9
0.0019
P10.5 crx+ retina
GTGGTTCACA (
32
)
32.7
0.0327
P10.5 crx+ retina
AAAATGACAA (
3
)
1.9
0.0019
P10.5 crx+ retina
CAGTAAGCAA
(
4
)
1.9
0.0019
Adult retinal
GTGGTTCACA (
32
)
33.3
0.0333
Adult retinal
ATTACGCCAA (
233
)
3.7
0.0037
Adult retinal
CAGTAAGCAA
(
4
)
1.9
0.0019
ONL
GTGGTTCACA (
32
)
32.6
0.0326
