Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.259876	Cstf3	cleavage stimulation factor, 3' pre-RNA, subunit 3	2	2 57.9 cM	228410
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	CSTF3[cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCAAAAAAAA (35) 22.8 0.0228 P8 Cb GC AACAATGCCA (2) 3.3 0.0033 P8 Cb GC ACATTTACAG (2) 1.6 0.0016 Cb medulloblastoma CCAAAAAAAA (35) 90.2 0.0902 Cb medulloblastoma GCCAGCCTGG (6) 4.6 0.0046 Cb medulloblastoma TCAGGAGACG 2.3 0.0023 P8 GC+1d culture CCAAAAAAAA (35) 38.8 0.0388 P8 GC+1d culture ACATTTACAG (2) 1.1 0.0011 P8 GC+1d culture TCAGGAGACG 1.1 0.0011 P8 GC+SHH+1d culture CCAAAAAAAA (35) 39.8 0.0398 P8 GC+SHH+1d culture ACATTTACAG (2) 2.3 0.0023 P8 GC+SHH+1d culture TCACTCAGTG (3) 1.2 0.0012 P8 GC+SHH+1d culture TCAGGAGACG 1.2 0.0012 3T3 fibroblasts GCCAGCCTGG (6) 21 0.021 E15 cortex CCAAAAAAAA (35) 9.9 0.0099 E15 cortex GCCAGCCTGG (6) 9.9 0.0099 E15 cortex ACATTTACAG (2) 4.9 0.0049 E15 cortex TCAGGAGACG 4.9 0.0049 P1 cortex CCAAAAAAAA (35) 40.9 0.0409 Hypothalamus CCAAAAAAAA (35) 38 0.038 Hypothalamus GCCAGCCTGG (6) 1.8 0.0018 Hypothalamus TCAGGAGACG 1.8 0.0018 E12.5 retina CCAAAAAAAA (35) 16.9 0.0169 E12.5 retina ACATTTACAG (2) 1.9 0.0019 E12.5 retina GCCAGCCTGG (6) 1.9 0.0019 E14.5 retina CCAAAAAAAA (35) 18.2 0.0182 E14.5 retina AACAATGCCA (2) 5.5 0.0055 E14.5 retina ACATTACAGA (4) 3.6 0.0036 E14.5 retina ACATTTACAG (2) 3.6 0.0036 E14.5 retina GCCAGCCTGG (6) 3.6 0.0036 E16.5 retina CCAAAAAAAA (35) 16.3 0.0163 E16.5 retina ACATTTACAG (2) 9.1 0.0091 E16.5 retina AACAATGCCA (2) 1.8 0.0018 E18.5 retina CCAAAAAAAA (35) 38.2 0.0382 P0.5 retina CCAAAAAAAA (35) 29.4 0.0294 P0.5 retina GCCAGCCTGG (6) 5.9 0.0059 P0.5 retina AACAATGCCA (2) 2 0.002 P0.5 retina TCAGGAGACG 2 0.002 P2.5 retina CCAAAAAAAA (35) 44 0.044 P2.5 retina GCCAGCCTGG (6) 3.5 0.0035 P4.5 retina CCAAAAAAAA (35) 39.6 0.0396 P4.5 retina GCCAGCCTGG (6) 4 0.004 P4.5 retina TCAGGAGACG 2 0.002 P6.5 retina CCAAAAAAAA (35) 38.3 0.0383 P6.5 retina TCACTCAGTG (3) 3.3 0.0033 P6.5 retina GCCAGCCTGG (6) 1.7 0.0017 P10.5 crx- retina CCAAAAAAAA (35) 14.9 0.0149 P10.5 crx- retina GCCAGCCTGG (6) 1.9 0.0019 P10.5 crx+ retina CCAAAAAAAA (35) 38.4 0.0384 P10.5 crx+ retina GCCAGCCTGG (6) 1.9 0.0019 P10.5 crx+ retina TCACTCAGTG (3) 1.9 0.0019 P10.5 crx+ retina TCAGGAGACG 1.9 0.0019 Adult retinal CCAAAAAAAA (35) 35.2 0.0352 Adult retinal GCCAGCCTGG (6) 1.9 0.0019 ONL CCAAAAAAAA (35) 7.7 0.0077 ONL ACATTACAGA (4) 1.9 0.0019 ONL GCCAGCCTGG (6) 1.9 0.0019