Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.260009	Nsun2	NOL1/NOP2/Sun domain family 2	13	13 40.0 cM	28114
Human Homolog	NSUN2[NOL1/NOP2/Sun domain family 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 124 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC CTAAAAAAAA (20) 11.4 0.0114 P8 Cb GC TTTTCTGCTG (5) 8.2 0.0082 P8 Cb GC AAATAAAGAG (2) 3.3 0.0033 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma CTAAAAAAAA (20) 39.3 0.0393 Cb medulloblastoma TTTTCTGCTG (5) 9.2 0.0092 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture CTAAAAAAAA (20) 19.4 0.0194 P8 GC+1d culture TTTTCTGCTG (5) 17.1 0.0171 P8 GC+1d culture ACAGCAGTTT (4) 2.3 0.0023 P8 GC+1d culture GCCTGCAGCT (4) 2.3 0.0023 P8 GC+1d culture CCACAGAGAT (2) 1.1 0.0011 P8 GC+1d culture TGTGCAGCCC (3) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture CTAAAAAAAA (20) 41 0.041 P8 GC+SHH+1d culture TTTTCTGCTG (5) 10.5 0.0105 P8 GC+SHH+1d culture CCACAGAGAT (2) 2.3 0.0023 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts TTTTCTGCTG (5) 10.5 0.0105 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex CTAAAAAAAA (20) 14.8 0.0148 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex GCCTGCAGCT (4) 4.9 0.0049 E15 cortex TTTTCTGCTG (5) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex TTTTCTGCTG (5) 9.1 0.0091 P1 cortex CTAAAAAAAA (20) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus CTAAAAAAAA (20) 16.3 0.0163 Hypothalamus TTTTCTGCTG (5) 3.6 0.0036 Hypothalamus TGTGCAGCCC (3) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina TTTTCTGCTG (5) 15 0.015 E12.5 retina CTAAAAAAAA (20) 11.3 0.0113 E12.5 retina AAATAAAGAG (2) 3.8 0.0038 E12.5 retina GCCTGCAGCT (4) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina CTAAAAAAAA (20) 12.8 0.0128 E14.5 retina TTTTCTGCTG (5) 3.6 0.0036 E14.5 retina AAATAAAGAG (2) 1.8 0.0018 E14.5 retina GCACTAAAAC (3) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina CTAAAAAAAA (20) 5.4 0.0054 E16.5 retina GCACTAAAAC (3) 1.8 0.0018 E16.5 retina TTTTCTGCTG (5) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina CTAAAAAAAA (20) 20 0.02 E18.5 retina TTTTCTGCTG (5) 9.1 0.0091 E18.5 retina AAATAAAGAG (2) 3.6 0.0036 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina TTTTCTGCTG (5) 13.7 0.0137 P0.5 retina CTAAAAAAAA (20) 5.9 0.0059 P0.5 retina GCCTGCAGCT (4) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina CTAAAAAAAA (20) 15.8 0.0158 P2.5 retina TTTTCTGCTG (5) 12.3 0.0123 P2.5 retina AAATAAAGAG (2) 1.8 0.0018 P2.5 retina ACAGCAGTTT (4) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina CTAAAAAAAA (20) 29.7 0.0297 P4.5 retina TTTTCTGCTG (5) 9.9 0.0099 P4.5 retina AAATAAAGAG (2) 2 0.002 P4.5 retina GCACTAAAAC (3) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina CTAAAAAAAA (20) 13.3 0.0133 P6.5 retina TTTTCTGCTG (5) 6.7 0.0067 P6.5 retina AAATAAAGAG (2) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina CTAAAAAAAA (20) 5.6 0.0056 P10.5 crx- retina TTTTCTGCTG (5) 5.6 0.0056 P10.5 crx- retina GCACTAAAAC (3) 3.7 0.0037 P10.5 crx- retina CCACAGAGAT (2) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina TTTTCTGCTG (5) 11.5 0.0115 P10.5 crx+ retina CTAAAAAAAA (20) 7.7 0.0077 P10.5 crx+ retina AAATAAAGAG (2) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal TTTTCTGCTG (5) 7.4 0.0074 Adult retinal CTAAAAAAAA (20) 5.6 0.0056 Adult retinal TGTGCAGCCC (3) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL CTAAAAAAAA (20) 1.9 0.0019 ONL GCCTGCAGCT (4) 1.9 0.0019 ONL TGTGCAGCCC (3) 1.9 0.0019 ONL TTTTCTGCTG (5) 1.9 0.0019