Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.260106
BC031748
cDNA sequence BC031748
X
245622
Human Homolog
CXorf39[chromosome X open reading frame 39]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 29 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TATTTTTATA (
12
)
4.9
0.0049
Cb medulloblastoma
AAACATCCTA
(
2
)
2.3
0.0023
P8 GC+1d culture
AAACATCCTA
(
2
)
3.4
0.0034
P8 GC+1d culture
TATTTTTATA (
12
)
2.3
0.0023
P8 GC+SHH+1d culture
AAACATCCTA
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TATTTTTATA (
12
)
1.2
0.0012
Hypothalamus
AAACATCCTA
(
2
)
7.2
0.0072
Hypothalamus
TATTTTTATA (
12
)
1.8
0.0018
E12.5 retina
AAACATCCTA
(
2
)
1.9
0.0019
E14.5 retina
AAAATATTTT (
8
)
3.6
0.0036
E14.5 retina
AAACATCCTA
(
2
)
3.6
0.0036
E14.5 retina
TATTTTTATA (
12
)
1.8
0.0018
E16.5 retina
AAACATCCTA
(
2
)
3.6
0.0036
E16.5 retina
TATTTTTATA (
12
)
1.8
0.0018
E18.5 retina
AAACATCCTA
(
2
)
5.5
0.0055
E18.5 retina
TATTTTTATA (
12
)
3.6
0.0036
E18.5 retina
AAAATATTTT (
8
)
1.8
0.0018
P2.5 retina
AAACATCCTA
(
2
)
3.5
0.0035
P2.5 retina
TATTTTTATA (
12
)
3.5
0.0035
P4.5 retina
AAACATCCTA
(
2
)
4
0.004
P4.5 retina
AAAATATTTT (
8
)
2
0.002
P4.5 retina
TATTTTTATA (
12
)
2
0.002
P6.5 retina
AAACATCCTA
(
2
)
3.3
0.0033
P6.5 retina
TATTTTTATA (
12
)
1.7
0.0017
P10.5 crx- retina
AAACATCCTA
(
2
)
3.7
0.0037
P10.5 crx+ retina
AAACATCCTA
(
2
)
1.9
0.0019
Adult retinal
TATTTTTATA (
12
)
1.9
0.0019
ONL
AAAATATTTT (
8
)
3.8
0.0038
ONL
AAACATCCTA
(
2
)
1.9
0.0019
