Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.260335	Pknox2	Pbx/knotted 1 homeobox 2	9		208076
Gene Ontology	biological_process unknown | cytoplasm | DNA binding | nucleus
Human Homolog	PKNOX2[PBX/knotted 1 homeobox 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTGTAATCC (34) 6.5 0.0065 P8 Cb GC CCTTCCCCAG (5) 1.6 0.0016 Cb medulloblastoma CCTGTAATCC (34) 11.6 0.0116 Cb medulloblastoma GAGTGTTTAA (2) 2.3 0.0023 Cb medulloblastoma GTAACCTCCC (3) 2.3 0.0023 P8 GC+1d culture AAAGCAACTG (2) 2.3 0.0023 P8 GC+1d culture CCTGTAATCC (34) 1.1 0.0011 P8 GC+SHH+1d culture CCTGTAATCC (34) 4.7 0.0047 P8 GC+SHH+1d culture GTAACCTCCC (3) 1.2 0.0012 3T3 fibroblasts CCTGTAATCC (34) 10.5 0.0105 3T3 fibroblasts CCTTCCCCAG (5) 3.5 0.0035 E15 cortex CCTGTAATCC (34) 4.9 0.0049 P1 cortex CCTGTAATCC (34) 13.6 0.0136 Hypothalamus CCTGTAATCC (34) 5.4 0.0054 Hypothalamus AAAGCAACTG (2) 1.8 0.0018 Hypothalamus CCTTCCCCAG (5) 1.8 0.0018 Hypothalamus GAGTGTTTAA (2) 1.8 0.0018 E12.5 retina CCTGTAATCC (34) 3.8 0.0038 E14.5 retina CCTGTAATCC (34) 5.5 0.0055 E14.5 retina TCTACATCTC 1.8 0.0018 E16.5 retina AAAGCAACTG (2) 7.2 0.0072 E16.5 retina CCTGTAATCC (34) 3.6 0.0036 E16.5 retina TCTACATCTC 1.8 0.0018 E18.5 retina CCTGTAATCC (34) 1.8 0.0018 P0.5 retina CCTGTAATCC (34) 3.9 0.0039 P0.5 retina TCTACATCTC 2 0.002 P2.5 retina CCTGTAATCC (34) 3.5 0.0035 P4.5 retina CCTGTAATCC (34) 5.9 0.0059 P4.5 retina AAAGCAACTG (2) 4 0.004 P6.5 retina AAAGCAACTG (2) 1.7 0.0017 P6.5 retina CCTGTAATCC (34) 1.7 0.0017 P10.5 crx- retina AAAGCAACTG (2) 5.6 0.0056 P10.5 crx- retina CCTGTAATCC (34) 3.7 0.0037 P10.5 crx- retina TCTACATCTC 3.7 0.0037 P10.5 crx+ retina CCTGTAATCC (34) 3.8 0.0038 P10.5 crx+ retina GTAACCTCCC (3) 1.9 0.0019 Adult retinal CCTGTAATCC (34) 3.7 0.0037 Adult retinal GAGTGTTTAA (2) 3.7 0.0037 ONL CCTGTAATCC (34) 3.8 0.0038