Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.260403
AU014645
expressed sequence AU014645
4
100261
Mm.260403
LOC433702
nuclear cap binding protein subunit 1, 80kDa
4
433702
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 51 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCTGGAATAA
(
2
)
9.8
0.0098
P8 Cb GC
GAACACTTCA (
3
)
1.6
0.0016
Cb medulloblastoma
GCTGGAATAA
(
2
)
9.2
0.0092
Cb medulloblastoma
GTGACCCTGG
(
9
)
2.3
0.0023
Cb medulloblastoma
TTCCCAGGAG
(
3
)
2.3
0.0023
P8 GC+1d culture
GCTGGAATAA
(
2
)
6.8
0.0068
P8 GC+1d culture
GCTGGAATAC (
6
)
1.1
0.0011
P8 GC+1d culture
GTGACCCTGG
(
9
)
1.1
0.0011
P8 GC+1d culture
GTGGACCCTG
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
GCTGGAATAA
(
2
)
7
0.007
P8 GC+SHH+1d culture
GTGACCCTGG
(
9
)
2.3
0.0023
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
GAACACTTCA (
3
)
3.5
0.0035
E15 cortex
GCTGGAATAA
(
2
)
9.9
0.0099
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
GTGGACCCTG
(
6
)
4.5
0.0045
P1 cortex
TTCCCAGAAA (
4
)
4.5
0.0045
Hypothalamus
GCTGGAATAA
(
2
)
3.6
0.0036
Hypothalamus
GTGGACCCTG
(
6
)
1.8
0.0018
E12.5 retina
GCTGGAATAA
(
2
)
7.5
0.0075
E12.5 retina
GAACACTTCA (
3
)
5.6
0.0056
E14.5 retina
GCTGGAATAA
(
2
)
9.1
0.0091
E14.5 retina
TTCCCAGAAA (
4
)
1.8
0.0018
E16.5 retina
GCTGGAATAA
(
2
)
7.2
0.0072
E16.5 retina
TTCCCAGGAG
(
3
)
1.8
0.0018
E18.5 retina
GCTGGAATAA
(
2
)
16.4
0.0164
E18.5 retina
GTGACCCTGG
(
9
)
1.8
0.0018
E18.5 retina
GTGGACCCTG
(
6
)
1.8
0.0018
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
GCTGGAATAA
(
2
)
2
0.002
P0.5 retina
GTGGACCCTG
(
6
)
2
0.002
P2.5 retina
GCTGGAATAA
(
2
)
7
0.007
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P2.5 retina
GTGACCCTGG
(
9
)
1.8
0.0018
P4.5 retina
GCTGGAATAA
(
2
)
19.8
0.0198
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P4.5 retina
TTCCCAGGAG
(
3
)
2
0.002
P6.5 retina
GCTGGAATAA
(
2
)
15
0.015
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P10.5 crx- retina
GCTGGAATAA
(
2
)
5.6
0.0056
P10.5 crx- retina
TTCCCAGAAA (
4
)
1.9
0.0019
P10.5 crx- retina
TTCCCAGGAG
(
3
)
1.9
0.0019
P10.5 crx+ retina
GCTGGAATAA
(
2
)
11.5
0.0115
Adult retinal
GTGGACCCTG
(
6
)
3.7
0.0037
Adult retinal
GCTGGAATAA
(
2
)
1.9
0.0019
Adult retinal
GCTGGAATAC (
6
)
1.9
0.0019
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
ONL
GCTGGAATAA
(
2
)
5.7
0.0057
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
GCTGGAATAC (
6
)
1.9
0.0019
ONL
GTGACCCTGG
(
9
)
1.9
0.0019
