Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.260481	Esrra	estrogen related receptor, alpha	19	19 A (19 3.0 cM)	26379
Gene Ontology	DNA binding | ligand-dependent nuclear receptor activity | membrane | nucleus | receptor activity | regulation of transcription, DNA-dependent | steroid hormone receptor activity | transcription factor activity | transport | transporter activity
Human Homolog	ESRRA[estrogen-related receptor alpha]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 6 In Situ Hybridization Images

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SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGACCCCC (3) 11.4 0.0114 P8 Cb GC GGGCAAGCCA (3) 6.5 0.0065 P8 Cb GC GCCCTGCGCC (3) 1.6 0.0016 Cb medulloblastoma TGTGACCCCC (3) 13.9 0.0139 Cb medulloblastoma GGGCAAGCCA (3) 9.2 0.0092 Cb medulloblastoma CAGGAAGCCC 2.3 0.0023 Cb medulloblastoma GCCCTGCGCC (3) 2.3 0.0023 P8 GC+1d culture TGTGACCCCC (3) 25.1 0.0251 P8 GC+1d culture GGCCTGGGCC (5) 4.6 0.0046 P8 GC+1d culture GGGCAAGCCA (3) 4.6 0.0046 P8 GC+SHH+1d culture TGTGACCCCC (3) 22.2 0.0222 P8 GC+SHH+1d culture GCCCTGCGCC (3) 3.5 0.0035 P8 GC+SHH+1d culture GGGCAAGCCA (3) 3.5 0.0035 P8 GC+SHH+1d culture GGCCTGGGCC (5) 2.3 0.0023 P8 GC+SHH+1d culture CAGGAAGCCC 1.2 0.0012 3T3 fibroblasts TGTGACCCCC (3) 3.5 0.0035 E15 cortex GGGCAAGCCA (3) 19.8 0.0198 E15 cortex TGTGACCCCC (3) 19.8 0.0198 Hypothalamus TGTGACCCCC (3) 19.9 0.0199 Hypothalamus GGGCAAGCCA (3) 7.2 0.0072 Hypothalamus GGCCTGGGCC (5) 3.6 0.0036 Hypothalamus GCCCTGCGCC (3) 1.8 0.0018 E12.5 retina TGTGACCCCC (3) 9.4 0.0094 E12.5 retina GGGCAAGCCA (3) 7.5 0.0075 E12.5 retina GGCCTGGGCC (5) 1.9 0.0019 E14.5 retina TGTGACCCCC (3) 23.7 0.0237 E14.5 retina GGGCAAGCCA (3) 1.8 0.0018 E16.5 retina TGTGACCCCC (3) 18.1 0.0181 E16.5 retina CCCTTCCCTC (3) 3.6 0.0036 E16.5 retina GGCCTGGGCC (5) 1.8 0.0018 E16.5 retina GGGCAAGCCA (3) 1.8 0.0018 E18.5 retina TGTGACCCCC (3) 14.6 0.0146 E18.5 retina GGGCAAGCCA (3) 3.6 0.0036 E18.5 retina CCCTTCCCTC (3) 1.8 0.0018 E18.5 retina GCCCTGCGCC (3) 1.8 0.0018 P0.5 retina TGTGACCCCC (3) 17.7 0.0177 P0.5 retina GGCCTGGGCC (5) 3.9 0.0039 P2.5 retina TGTGACCCCC (3) 21.1 0.0211 P2.5 retina GGGCAAGCCA (3) 10.6 0.0106 P2.5 retina GGCCTGGGCC (5) 3.5 0.0035 P4.5 retina TGTGACCCCC (3) 15.9 0.0159 P4.5 retina GGGCAAGCCA (3) 4 0.004 P4.5 retina GCCCTGCGCC (3) 2 0.002 P4.5 retina GGCCTGGGCC (5) 2 0.002 P6.5 retina TGTGACCCCC (3) 28.3 0.0283 P6.5 retina GGGCAAGCCA (3) 3.3 0.0033 P10.5 crx- retina TGTGACCCCC (3) 9.3 0.0093 P10.5 crx- retina GGGCAAGCCA (3) 7.4 0.0074 P10.5 crx+ retina TGTGACCCCC (3) 13.5 0.0135 P10.5 crx+ retina GGGCAAGCCA (3) 11.5 0.0115 P10.5 crx+ retina GGCCTGGGCC (5) 1.9 0.0019 Adult retinal TGTGACCCCC (3) 24.1 0.0241 Adult retinal GGCCTGGGCC (5) 9.3 0.0093 Adult retinal GGGCAAGCCA (3) 9.3 0.0093 Adult retinal CCCTTCCCTC (3) 3.7 0.0037 ONL TGTGACCCCC (3) 7.7 0.0077 ONL GGGCAAGCCA (3) 5.7 0.0057 ONL CAGGAAGCCC 3.8 0.0038