Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.260521	6330412C24Rik	RIKEN cDNA 6330412C24 gene	3		70742
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 103 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GATGCTTTGG (6) 3.3 0.0033 P8 Cb GC TTATGCCTTA 3.3 0.0033 P8 Cb GC CTTGAAAAAA (7) 1.6 0.0016 P8 Cb GC CTTTAACTTT (3) 1.6 0.0016 P8 Cb GC GCAGTGAGTG (5) 1.6 0.0016 P8 Cb GC TCACTAAGTT (7) 1.6 0.0016 P8 Cb GC TCCTAGAAAA 1.6 0.0016 P8 Cb GC TCCTCTGTAA 1.6 0.0016 Cb medulloblastoma TCCTAGAAAA 4.6 0.0046 Cb medulloblastoma AAGAACCACA (5) 2.3 0.0023 Cb medulloblastoma CTTTAACTTT (3) 2.3 0.0023 Cb medulloblastoma GATGAAAAAA (9) 2.3 0.0023 Cb medulloblastoma GATGCTTTGG (6) 2.3 0.0023 Cb medulloblastoma TCACTAAGTT (7) 2.3 0.0023 P8 GC+1d culture GATGCTTTGG (6) 4.6 0.0046 P8 GC+1d culture TTATGCCTTA 3.4 0.0034 P8 GC+1d culture CTTGAAAAAA (7) 1.1 0.0011 P8 GC+1d culture GTACAAATCT (2) 1.1 0.0011 P8 GC+1d culture TCCTCTGTAA 1.1 0.0011 P8 GC+1d culture TTTTCCAGAA (4) 1.1 0.0011 P8 GC+SHH+1d culture TTTTCCAGAA (4) 4.7 0.0047 P8 GC+SHH+1d culture CTTGAAAAAA (7) 2.3 0.0023 P8 GC+SHH+1d culture GTACAAATCT (2) 2.3 0.0023 P8 GC+SHH+1d culture TGATTGTGCT (2) 2.3 0.0023 P8 GC+SHH+1d culture AAGAACCACA (5) 1.2 0.0012 P8 GC+SHH+1d culture CTTTAACTTT (3) 1.2 0.0012 P8 GC+SHH+1d culture GATGAAAAAA (9) 1.2 0.0012 P8 GC+SHH+1d culture GCAGTGAGTG (5) 1.2 0.0012 P8 GC+SHH+1d culture TCCTAGAAAA 1.2 0.0012 P8 GC+SHH+1d culture TCCTCTGTAA 1.2 0.0012 3T3 fibroblasts GCAGTGAGTG (5) 3.5 0.0035 E15 cortex CAAAGAGAAC (3) 4.9 0.0049 E15 cortex GCAGTGAGTG (5) 4.9 0.0049 P1 cortex TCCCTAAAAA (3) 4.5 0.0045 Hypothalamus CAAAGAGAAC (3) 7.2 0.0072 Hypothalamus GATGAAAAAA (9) 1.8 0.0018 Hypothalamus TTTTCCAGAA (4) 1.8 0.0018 E12.5 retina TTTTCCAGAA (4) 3.8 0.0038 E12.5 retina AATCATTCAA (4) 1.9 0.0019 E14.5 retina AATCATTCAA (4) 3.6 0.0036 E14.5 retina GATGCTTTGG (6) 3.6 0.0036 E14.5 retina GCAGTGAGTG (5) 3.6 0.0036 E14.5 retina GTACAAATCT (2) 1.8 0.0018 E14.5 retina TCCTAGAAAA 1.8 0.0018 E16.5 retina GCAGTGAGTG (5) 5.4 0.0054 E16.5 retina TTTTCCAGAA (4) 5.4 0.0054 E16.5 retina TCACTGAGTT (2) 3.6 0.0036 E16.5 retina TCACTAAGTT (7) 1.8 0.0018 E16.5 retina TCCTCTGTAA 1.8 0.0018 E18.5 retina TTTTCCAGAA (4) 3.6 0.0036 E18.5 retina AATCATTCAA (4) 1.8 0.0018 E18.5 retina CTTGAAAAAA (7) 1.8 0.0018 E18.5 retina GATGCTTTGG (6) 1.8 0.0018 E18.5 retina GCAGTGAGTG (5) 1.8 0.0018 P0.5 retina AATCATTCAA (4) 3.9 0.0039 P0.5 retina GATGCTTTGG (6) 3.9 0.0039 P0.5 retina GCAGTGAGTG (5) 3.9 0.0039 P0.5 retina GATGAAAAAA (9) 2 0.002 P0.5 retina TCACTGAGTT (2) 2 0.002 P0.5 retina TCCCTAAAAA (3) 2 0.002 P2.5 retina TTATGCCTTA 5.3 0.0053 P2.5 retina TCCTAGAAAA 3.5 0.0035 P2.5 retina AATCATTCAA (4) 1.8 0.0018 P2.5 retina GATGCTTTGG (6) 1.8 0.0018 P2.5 retina GTACAAATCT (2) 1.8 0.0018 P2.5 retina TGATTGTGCT (2) 1.8 0.0018 P2.5 retina TTTTCCAGAA (4) 1.8 0.0018 P4.5 retina GCAGTGAGTG (5) 5.9 0.0059 P4.5 retina GTACAAATCT (2) 4 0.004 P4.5 retina TCCTAGAAAA 4 0.004 P4.5 retina TTTTCCAGAA (4) 4 0.004 P4.5 retina TTATGCCTTA 2 0.002 P6.5 retina GATGCTTTGG (6) 8.3 0.0083 P6.5 retina CTTTAACTTT (3) 1.7 0.0017 P6.5 retina GTACAAATCT (2) 1.7 0.0017 P6.5 retina TCACTAAGTT (7) 1.7 0.0017 P6.5 retina TCCCTAAAAA (3) 1.7 0.0017 P6.5 retina TTATGCCTTA 1.7 0.0017 P6.5 retina TTTTCCAGAA (4) 1.7 0.0017 P10.5 crx- retina GATGCTTTGG (6) 5.6 0.0056 P10.5 crx- retina TGATTGTGCT (2) 3.7 0.0037 P10.5 crx- retina TTTTCCAGAA (4) 3.7 0.0037 P10.5 crx- retina TCACTAAGTT (7) 1.9 0.0019 P10.5 crx- retina TCCTAGAAAA 1.9 0.0019 P10.5 crx+ retina TGATTGTGCT (2) 5.8 0.0058 P10.5 crx+ retina GCAGTGAGTG (5) 3.8 0.0038 P10.5 crx+ retina GATGCTTTGG (6) 1.9 0.0019 P10.5 crx+ retina TCACTAAGTT (7) 1.9 0.0019 P10.5 crx+ retina TCCTAGAAAA 1.9 0.0019 Adult retinal TGATTGTGCT (2) 11.1 0.0111 Adult retinal TCACTAAGTT (7) 7.4 0.0074 Adult retinal AATCATTCAA (4) 1.9 0.0019 Adult retinal CAAAGAGAAC (3) 1.9 0.0019 Adult retinal CTTTAACTTT (3) 1.9 0.0019 Adult retinal GATGCTTTGG (6) 1.9 0.0019 Adult retinal TCCTAGAAAA 1.9 0.0019 ONL TGATTGTGCT (2) 7.7 0.0077 ONL GATGCTTTGG (6) 3.8 0.0038 ONL TCCCTAAAAA (3) 3.8 0.0038 ONL TCACTAAGTT (7) 1.9 0.0019 ONL TCCTAGAAAA 1.9 0.0019 ONL TTATGCCTTA 1.9 0.0019 ONL TTTTCCAGAA (4) 1.9 0.0019