Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.260576
6030446M11Rik
RIKEN cDNA 6030446M11 gene
5
77879
Mm.260576
Cdk8
cyclin-dependent kinase 8
5
264064
Mm.260576
AL024446
expressed sequence AL024446
5
404566
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AATGACACAA
(
4
)
8.2
0.0082
P8 Cb GC
TGGAAAGTGC (
4
)
1.6
0.0016
Cb medulloblastoma
AATGACACAA
(
4
)
2.3
0.0023
P8 GC+1d culture
AATGACACAA
(
4
)
1.1
0.0011
P8 GC+1d culture
TAAAATAGTT
(
4
)
1.1
0.0011
P8 GC+1d culture
TTAAAAACAA (
8
)
1.1
0.0011
P8 GC+SHH+1d culture
AATGACACAA
(
4
)
3.5
0.0035
P8 GC+SHH+1d culture
TTAAAAACAA (
8
)
3.5
0.0035
P8 GC+SHH+1d culture
TGGAAAGTGC (
4
)
2.3
0.0023
E15 cortex
AATGACACAA
(
4
)
4.9
0.0049
P1 cortex
AATGACACAA
(
4
)
9.1
0.0091
Hypothalamus
AATAAAAATC
(
6
)
5.4
0.0054
Hypothalamus
AATGACACAA
(
4
)
1.8
0.0018
Hypothalamus
TGGAAAGTGC (
4
)
1.8
0.0018
Hypothalamus
TTAAAAACAA (
8
)
1.8
0.0018
E12.5 retina
AATGACACAA
(
4
)
7.5
0.0075
E12.5 retina
TGGAAAGTGC (
4
)
1.9
0.0019
E14.5 retina
AATGACACAA
(
4
)
10.9
0.0109
E14.5 retina
TAAAATAGTT
(
4
)
1.8
0.0018
E16.5 retina
AATGACACAA
(
4
)
5.4
0.0054
E16.5 retina
TGGAAAGTGC (
4
)
1.8
0.0018
E16.5 retina
TTAAAAACAA (
8
)
1.8
0.0018
E18.5 retina
AATGACACAA
(
4
)
5.5
0.0055
E18.5 retina
TGGAAAGTGC (
4
)
1.8
0.0018
P0.5 retina
AATGACACAA
(
4
)
2
0.002
P2.5 retina
AATGACACAA
(
4
)
5.3
0.0053
P2.5 retina
TTAAAAACAA (
8
)
1.8
0.0018
P4.5 retina
AATGACACAA
(
4
)
2
0.002
P4.5 retina
TTAAAAACAA (
8
)
2
0.002
P6.5 retina
AATGACACAA
(
4
)
8.3
0.0083
P6.5 retina
TAAAATAGTT
(
4
)
1.7
0.0017
P10.5 crx- retina
AATGACACAA
(
4
)
11.1
0.0111
P10.5 crx+ retina
AATGACACAA
(
4
)
7.7
0.0077
P10.5 crx+ retina
TAAAATAGTT
(
4
)
1.9
0.0019
P10.5 crx+ retina
TTAAAAACAA (
8
)
1.9
0.0019
Adult retinal
AATGACACAA
(
4
)
3.7
0.0037
Adult retinal
TTAAAAACAA (
8
)
1.9
0.0019
ONL
AATGACACAA
(
4
)
9.6
0.0096
ONL
TGGAAAGTGC (
4
)
1.9
0.0019
ONL
TTAAAAACAA (
8
)
1.9
0.0019
