Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.260635
Axot
axotrophin
2
57438
Mm.260635
3110023J12Rik
RIKEN cDNA 3110023J12 gene
2
73134
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 51 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TACGTTGTCA
(
2
)
8.2
0.0082
P8 Cb GC
AAATTATATG (
4
)
1.6
0.0016
P8 Cb GC
CAAATGAACA
(
2
)
1.6
0.0016
P8 Cb GC
TGCTCGAGAA (
7
)
1.6
0.0016
P8 GC+1d culture
TACGTTGTCA
(
2
)
10.3
0.0103
P8 GC+1d culture
GTGATGCACA (
8
)
2.3
0.0023
P8 GC+1d culture
GTTTCTATTT
(
4
)
2.3
0.0023
P8 GC+1d culture
AAATTATATG (
4
)
1.1
0.0011
P8 GC+1d culture
CAAATGAACA
(
2
)
1.1
0.0011
P8 GC+1d culture
TCATCTACTT
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TACGTTGTCA
(
2
)
8.2
0.0082
P8 GC+SHH+1d culture
AAATTATATG (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GTCAAGTTCC (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
TGCTCGAGAA (
7
)
1.2
0.0012
3T3 fibroblasts
GTCAAGTTCC (
5
)
7
0.007
3T3 fibroblasts
TACGTTGTCA
(
2
)
3.5
0.0035
P1 cortex
TACGTTGTCA
(
2
)
4.5
0.0045
Hypothalamus
TACGTTGTCA
(
2
)
10.9
0.0109
Hypothalamus
TCATCTACTT
(
4
)
3.6
0.0036
Hypothalamus
CAAATGAACA
(
2
)
1.8
0.0018
Hypothalamus
TGCTCGAGAA (
7
)
1.8
0.0018
E12.5 retina
AAATTATATG (
4
)
1.9
0.0019
E12.5 retina
GTTTCTATTT
(
4
)
1.9
0.0019
E14.5 retina
TACGTTGTCA
(
2
)
5.5
0.0055
E14.5 retina
TCATCTACTT
(
4
)
1.8
0.0018
E14.5 retina
TGCTCGAGAA (
7
)
1.8
0.0018
E16.5 retina
TACGTTGTCA
(
2
)
9.1
0.0091
E16.5 retina
AAATTATATG (
4
)
1.8
0.0018
E16.5 retina
TGCTCGAGAA (
7
)
1.8
0.0018
E18.5 retina
TACGTTGTCA
(
2
)
16.4
0.0164
E18.5 retina
AAATTATATG (
4
)
5.5
0.0055
E18.5 retina
ACTCTCAGGC
(
3
)
1.8
0.0018
P0.5 retina
TACGTTGTCA
(
2
)
2
0.002
P2.5 retina
TACGTTGTCA
(
2
)
8.8
0.0088
P2.5 retina
GTGATGCACA (
8
)
1.8
0.0018
P4.5 retina
TACGTTGTCA
(
2
)
4
0.004
P4.5 retina
CAAATGAACA
(
2
)
2
0.002
P4.5 retina
TCATCTACTT
(
4
)
2
0.002
P6.5 retina
TACGTTGTCA
(
2
)
8.3
0.0083
P6.5 retina
AAATTATATG (
4
)
1.7
0.0017
P6.5 retina
CAAATGAACA
(
2
)
1.7
0.0017
P10.5 crx- retina
TACGTTGTCA
(
2
)
7.4
0.0074
P10.5 crx- retina
AAATTATATG (
4
)
5.6
0.0056
P10.5 crx- retina
ACTCTCAGGC
(
3
)
3.7
0.0037
P10.5 crx- retina
CAAATGAACA
(
2
)
1.9
0.0019
P10.5 crx+ retina
TACGTTGTCA
(
2
)
7.7
0.0077
P10.5 crx+ retina
GTGATGCACA (
8
)
1.9
0.0019
Adult retinal
TACGTTGTCA
(
2
)
14.8
0.0148
Adult retinal
AAATTATATG (
4
)
1.9
0.0019
ONL
TGCTCGAGAA (
7
)
3.8
0.0038
ONL
AAATTATATG (
4
)
1.9
0.0019
