Mouse Retina SAGE Library
[
Home
] [
Libraries
] [
Images
]
Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.260938
C78895
expressed sequence C78895
2
96974
Mm.260938
C130057M05Rik
RIKEN cDNA C130057M05 gene
2
399581
Mm.260938
Pkp4
plakophilin 4
2
227937
Human Homolog
PKP4[plakophilin 4]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 72 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAGAATGGCA (
10
)
8.2
0.0082
P8 Cb GC
AAAGTGAAGG (
6
)
4.9
0.0049
P8 Cb GC
GAAGAATAAT
(
5
)
3.3
0.0033
Cb medulloblastoma
GAGAATGGCA (
10
)
23.1
0.0231
Cb medulloblastoma
GAAGAATAAT
(
5
)
16.2
0.0162
Cb medulloblastoma
AAAGTGAAGG (
6
)
9.2
0.0092
P8 GC+1d culture
GAGAATGGCA (
10
)
5.7
0.0057
P8 GC+1d culture
AAAGTGAAGG (
6
)
1.1
0.0011
P8 GC+1d culture
GAAGAATAAT
(
5
)
1.1
0.0011
P8 GC+SHH+1d culture
GAAGAATAAT
(
5
)
8.2
0.0082
P8 GC+SHH+1d culture
AAAGTGAAGG (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
GAGAATGCCA
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GAGAATGGCA (
10
)
1.2
0.0012
E15 cortex
AAAGTGAAGG (
6
)
4.9
0.0049
Hypothalamus
GAGAATGGCA (
10
)
18.1
0.0181
Hypothalamus
GAAGAATAAT
(
5
)
12.7
0.0127
Hypothalamus
AAAGTGAAGG (
6
)
5.4
0.0054
Hypothalamus
AACAGTGAGG (
6
)
1.8
0.0018
E12.5 retina
GAAGAATAAT
(
5
)
7.5
0.0075
E12.5 retina
AAAGTGAAGG (
6
)
5.6
0.0056
E12.5 retina
AAGGGCATCC
(
3
)
1.9
0.0019
E12.5 retina
GAGAATGGCA (
10
)
1.9
0.0019
E14.5 retina
AAAGTGAAGG (
6
)
7.3
0.0073
E14.5 retina
AACAGTGAGG (
6
)
3.6
0.0036
E14.5 retina
GAAGAATAAT
(
5
)
3.6
0.0036
E14.5 retina
GAGAATGGCA (
10
)
3.6
0.0036
E14.5 retina
AAGGGCATCC
(
3
)
1.8
0.0018
E14.5 retina
GAGAATGCCA
(
4
)
1.8
0.0018
E16.5 retina
GAAGAATAAT
(
5
)
5.4
0.0054
E16.5 retina
GAGAATGGCA (
10
)
5.4
0.0054
E16.5 retina
CCTGGGCCAG
(
5
)
1.8
0.0018
E18.5 retina
GAAGAATAAT
(
5
)
14.6
0.0146
E18.5 retina
GAGAATGGCA (
10
)
14.6
0.0146
E18.5 retina
AAAGTGAAGG (
6
)
1.8
0.0018
E18.5 retina
AAGGGCATCC
(
3
)
1.8
0.0018
E18.5 retina
GAAAGAAATA (
7
)
1.8
0.0018
P0.5 retina
GAGAATGGCA (
10
)
9.8
0.0098
P0.5 retina
AAAGTGAAGG (
6
)
7.9
0.0079
P0.5 retina
AAGGGCATCC
(
3
)
3.9
0.0039
P0.5 retina
GAAGAATAAT
(
5
)
2
0.002
P0.5 retina
GAGAATGCCA
(
4
)
2
0.002
P2.5 retina
GAAGAATAAT
(
5
)
17.6
0.0176
P2.5 retina
GAGAATGGCA (
10
)
10.6
0.0106
P2.5 retina
CCTGGGCCAG
(
5
)
3.5
0.0035
P2.5 retina
AAAGTGAAGG (
6
)
1.8
0.0018
P2.5 retina
AACAGTGAGG (
6
)
1.8
0.0018
P2.5 retina
GAAAGAAATA (
7
)
1.8
0.0018
P4.5 retina
GAGAATGGCA (
10
)
13.9
0.0139
P4.5 retina
GAAGAATAAT
(
5
)
7.9
0.0079
P4.5 retina
AAAGTGAAGG (
6
)
4
0.004
P4.5 retina
GAAAGAAATA (
7
)
2
0.002
P6.5 retina
GAGAATGGCA (
10
)
10
0.01
P6.5 retina
AAAGTGAAGG (
6
)
5
0.005
P6.5 retina
CCTGGGCCAG
(
5
)
1.7
0.0017
P6.5 retina
GAAGAATAAT
(
5
)
1.7
0.0017
P10.5 crx- retina
AAAGTGAAGG (
6
)
9.3
0.0093
P10.5 crx- retina
GAAAGAAATA (
7
)
5.6
0.0056
P10.5 crx- retina
AACAGTGAGG (
6
)
1.9
0.0019
P10.5 crx- retina
CCTGGGCCAG
(
5
)
1.9
0.0019
P10.5 crx- retina
GAGAATGGCA (
10
)
1.9
0.0019
P10.5 crx+ retina
AAAGTGAAGG (
6
)
19.2
0.0192
P10.5 crx+ retina
CCTGGGCCAG
(
5
)
5.8
0.0058
P10.5 crx+ retina
GAAAGAAATA (
7
)
3.8
0.0038
P10.5 crx+ retina
GAAGAATAAT
(
5
)
3.8
0.0038
P10.5 crx+ retina
GAGAATGGCA (
10
)
3.8
0.0038
Adult retinal
GAGAATGGCA (
10
)
9.3
0.0093
Adult retinal
AAAGTGAAGG (
6
)
1.9
0.0019
Adult retinal
AAGGGCATCC
(
3
)
1.9
0.0019
ONL
AAAGTGAAGG (
6
)
5.7
0.0057
ONL
GAAAGAAATA (
7
)
5.7
0.0057
ONL
GAGAATGGCA (
10
)
5.7
0.0057
ONL
GAAGAATAAT
(
5
)
1.9
0.0019
