Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.260956
9630054F20Rik
RIKEN cDNA 9630054F20 gene
11
327900
Human Homolog
DC-UbP[dendritic cell-derived ubiquitin-like protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 46 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGAAACACTG (
4
)
21.2
0.0212
P8 Cb GC
GTGCTGGTAA
(
4
)
6.5
0.0065
P8 Cb GC
CCTGGAGGAT
1.6
0.0016
Cb medulloblastoma
GTGCTGGTAA
(
4
)
4.6
0.0046
Cb medulloblastoma
TGAAACACTG (
4
)
2.3
0.0023
Cb medulloblastoma
TGTACTGCCT (
3
)
2.3
0.0023
P8 GC+1d culture
TGAAACACTG (
4
)
9.1
0.0091
P8 GC+1d culture
TGTACTGCCT (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TGAAACACTG (
4
)
17.6
0.0176
P8 GC+SHH+1d culture
GTGCTGGTAA
(
4
)
4.7
0.0047
P8 GC+SHH+1d culture
CCTGGAGGAT
2.3
0.0023
3T3 fibroblasts
TGAAACACTG (
4
)
3.5
0.0035
3T3 fibroblasts
TTGTACCTGC
(
2
)
3.5
0.0035
E15 cortex
TGAAACACTG (
4
)
4.9
0.0049
E15 cortex
TTGTACCTGC
(
2
)
4.9
0.0049
P1 cortex
CCTGGAGGAT
9.1
0.0091
Hypothalamus
GTGCTGGTAA
(
4
)
3.6
0.0036
Hypothalamus
TGAAACACTG (
4
)
3.6
0.0036
Hypothalamus
TTGTACCTGC
(
2
)
1.8
0.0018
E12.5 retina
CCTGGAGGAT
5.6
0.0056
E12.5 retina
GTGCTGGTAA
(
4
)
5.6
0.0056
E12.5 retina
TGAAACACTG (
4
)
5.6
0.0056
E14.5 retina
GTGCTGGTAA
(
4
)
3.6
0.0036
E14.5 retina
TGAAACACTG (
4
)
3.6
0.0036
E16.5 retina
GTGCTGGTAA
(
4
)
12.7
0.0127
E16.5 retina
TGAAACACTG (
4
)
7.2
0.0072
E16.5 retina
TTGTACCTGC
(
2
)
3.6
0.0036
E16.5 retina
TGTACTGCCT (
3
)
1.8
0.0018
E18.5 retina
TGAAACACTG (
4
)
18.2
0.0182
E18.5 retina
CCTGGAGGAT
3.6
0.0036
E18.5 retina
GTGCTGGTAA
(
4
)
3.6
0.0036
E18.5 retina
TTGTACCTGC
(
2
)
1.8
0.0018
P0.5 retina
TGAAACACTG (
4
)
7.9
0.0079
P0.5 retina
GTGCTGGTAA
(
4
)
2
0.002
P2.5 retina
TGAAACACTG (
4
)
21.1
0.0211
P2.5 retina
GTGCTGGTAA
(
4
)
5.3
0.0053
P2.5 retina
TTGTACCTGC
(
2
)
1.8
0.0018
P4.5 retina
TGAAACACTG (
4
)
31.7
0.0317
P6.5 retina
TGAAACACTG (
4
)
15
0.015
P6.5 retina
GTGCTGGTAA
(
4
)
5
0.005
P10.5 crx- retina
TGAAACACTG (
4
)
7.4
0.0074
P10.5 crx- retina
GTGCTGGTAA
(
4
)
1.9
0.0019
P10.5 crx+ retina
TGAAACACTG (
4
)
13.5
0.0135
P10.5 crx+ retina
GTGCTGGTAA
(
4
)
5.8
0.0058
Adult retinal
TGAAACACTG (
4
)
13
0.013
ONL
TGAAACACTG (
4
)
3.8
0.0038
