Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.260997
Acad9
acyl-Coenzyme A dehydrogenase family, member 9
3
229211
Mm.260997
C630012L17Rik
RIKEN cDNA C630012L17 gene
3
320758
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 94 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TCTGGGTGTG (
4
)
11.4
0.0114
P8 Cb GC
TGGGTTTGGG (
7
)
3.3
0.0033
P8 Cb GC
TTCTGTGTGG (
6
)
3.3
0.0033
P8 Cb GC
AAAAAAATAT (
13
)
1.6
0.0016
P8 Cb GC
ACCGTGAGGG
(
2
)
1.6
0.0016
P8 Cb GC
CAGCCACACA (
11
)
1.6
0.0016
Cb medulloblastoma
TTCTGTGTGG (
6
)
16.2
0.0162
Cb medulloblastoma
ACCGTGAGGG
(
2
)
4.6
0.0046
Cb medulloblastoma
CAGCCACACA (
11
)
4.6
0.0046
Cb medulloblastoma
AAAAAAATAT (
13
)
2.3
0.0023
P8 GC+1d culture
TCTGGGTGTG (
4
)
4.6
0.0046
P8 GC+1d culture
TTCTGTGTGG (
6
)
3.4
0.0034
P8 GC+1d culture
AAGGCCAAGT (
2
)
2.3
0.0023
P8 GC+1d culture
CAGCCACACA (
11
)
2.3
0.0023
P8 GC+1d culture
ACCGTGAGGG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TCTGGGTGTG (
4
)
15.2
0.0152
P8 GC+SHH+1d culture
ACCGTGAGGG
(
2
)
5.9
0.0059
P8 GC+SHH+1d culture
CTGGGCTCCT (
9
)
3.5
0.0035
P8 GC+SHH+1d culture
TTCTGTGTGG (
6
)
3.5
0.0035
3T3 fibroblasts
TCTGGGTGTG (
4
)
31.5
0.0315
3T3 fibroblasts
ACCGTGAGGG
(
2
)
3.5
0.0035
3T3 fibroblasts
CCCAGCTCCC
(
3
)
3.5
0.0035
3T3 fibroblasts
CTGGGCTCCT (
9
)
3.5
0.0035
3T3 fibroblasts
TTCTGTGTGG (
6
)
3.5
0.0035
E15 cortex
ACCGTGAGGG
(
2
)
9.9
0.0099
P1 cortex
ACCGTGAGGG
(
2
)
4.5
0.0045
P1 cortex
TCTGGGTGTG (
4
)
4.5
0.0045
P1 cortex
TTCTGTGTGG (
6
)
4.5
0.0045
Hypothalamus
AAGGCCAAGT (
2
)
1.8
0.0018
Hypothalamus
ACCGTGAGGG
(
2
)
1.8
0.0018
Hypothalamus
CAGCCACACA (
11
)
1.8
0.0018
Hypothalamus
TTCTGTGTGG (
6
)
1.8
0.0018
E12.5 retina
TCTGGGTGTG (
4
)
15
0.015
E12.5 retina
ACCGTGAGGG
(
2
)
7.5
0.0075
E12.5 retina
CCCAGCTCCC
(
3
)
1.9
0.0019
E12.5 retina
CTGGGCTCCT (
9
)
1.9
0.0019
E12.5 retina
TATAAAGAAA
(
3
)
1.9
0.0019
E12.5 retina
TTCTGTGTGG (
6
)
1.9
0.0019
E14.5 retina
TTCTGTGTGG (
6
)
18.2
0.0182
E14.5 retina
ACCGTGAGGG
(
2
)
3.6
0.0036
E14.5 retina
AAGGCCAAGT (
2
)
1.8
0.0018
E14.5 retina
CAGCCACACA (
11
)
1.8
0.0018
E14.5 retina
TCTGGGTGTG (
4
)
1.8
0.0018
E16.5 retina
TTCTGTGTGG (
6
)
23.5
0.0235
E16.5 retina
AAGGCCAAGT (
2
)
3.6
0.0036
E16.5 retina
ACCGTGAGGG
(
2
)
3.6
0.0036
E16.5 retina
TCTGGGTGTG (
4
)
3.6
0.0036
E16.5 retina
CAGCCACACA (
11
)
1.8
0.0018
E16.5 retina
CCCAGCTCCC
(
3
)
1.8
0.0018
E16.5 retina
CTGGGCTCCT (
9
)
1.8
0.0018
E16.5 retina
TATAAAGAAA
(
3
)
1.8
0.0018
E18.5 retina
TCTGGGTGTG (
4
)
9.1
0.0091
E18.5 retina
TTCTGTGTGG (
6
)
7.3
0.0073
E18.5 retina
ACCGTGAGGG
(
2
)
3.6
0.0036
E18.5 retina
TGGGTTTGGG (
7
)
3.6
0.0036
P0.5 retina
TTCTGTGTGG (
6
)
7.9
0.0079
P0.5 retina
ACCGTGAGGG
(
2
)
3.9
0.0039
P0.5 retina
CCCAGCTCCC
(
3
)
3.9
0.0039
P0.5 retina
CAGCCACACA (
11
)
2
0.002
P0.5 retina
CTGGGCTCCT (
9
)
2
0.002
P0.5 retina
TGGGTTTGGG (
7
)
2
0.002
P2.5 retina
TTCTGTGTGG (
6
)
33.4
0.0334
P2.5 retina
ACCGTGAGGG
(
2
)
10.6
0.0106
P2.5 retina
TCTGGGTGTG (
4
)
8.8
0.0088
P2.5 retina
AAAAAAATAT (
13
)
1.8
0.0018
P2.5 retina
ACTGCTGTGC (
3
)
1.8
0.0018
P2.5 retina
CCCAGCTCCC
(
3
)
1.8
0.0018
P2.5 retina
CTGGGCTCCT (
9
)
1.8
0.0018
P4.5 retina
TTCTGTGTGG (
6
)
27.7
0.0277
P4.5 retina
ACCGTGAGGG
(
2
)
4
0.004
P4.5 retina
TCTGGGTGTG (
4
)
4
0.004
P6.5 retina
TTCTGTGTGG (
6
)
6.7
0.0067
P6.5 retina
AAGGCCAAGT (
2
)
1.7
0.0017
P6.5 retina
ACCGTGAGGG
(
2
)
1.7
0.0017
P6.5 retina
CCCAGCTCCC
(
3
)
1.7
0.0017
P10.5 crx- retina
ACCGTGAGGG
(
2
)
3.7
0.0037
P10.5 crx- retina
TTCTGTGTGG (
6
)
3.7
0.0037
P10.5 crx- retina
ACTGCTGTGC (
3
)
1.9
0.0019
P10.5 crx+ retina
TTCTGTGTGG (
6
)
9.6
0.0096
P10.5 crx+ retina
AAGGCCAAGT (
2
)
1.9
0.0019
P10.5 crx+ retina
ACCGTGAGGG
(
2
)
1.9
0.0019
P10.5 crx+ retina
ACTGCTGTGC (
3
)
1.9
0.0019
P10.5 crx+ retina
CAGCCACACA (
11
)
1.9
0.0019
P10.5 crx+ retina
CCCAGCTCCC
(
3
)
1.9
0.0019
P10.5 crx+ retina
TCTGGGTGTG (
4
)
1.9
0.0019
P10.5 crx+ retina
TGGGTTTGGG (
7
)
1.9
0.0019
Adult retinal
ACCGTGAGGG
(
2
)
3.7
0.0037
Adult retinal
CTGGGCTCCT (
9
)
1.9
0.0019
ONL
CAGCCACACA (
11
)
3.8
0.0038
ONL
AAAAAAATAT (
13
)
1.9
0.0019
ONL
AAGGCCAAGT (
2
)
1.9
0.0019
ONL
ACCGTGAGGG
(
2
)
1.9
0.0019
ONL
TATAAAGAAA
(
3
)
1.9
0.0019
ONL
TGGGTTTGGG (
7
)
1.9
0.0019
