Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.261389
0610038K03Rik
RIKEN cDNA 0610038K03 gene
10
68371
Mm.261389
3110049J23Rik
RIKEN cDNA 3110049J23 gene
10
67307
Gene Ontology
biosynthesis
|
catalytic activity
|
oxidoreductase activity
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 59 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
TTTTTTTTTT (
433
)
4.9
0.0049
P8 Cb GC
ATCTGACTCC
(
2
)
3.3
0.0033
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
TTTTTTTTTT (
433
)
2.3
0.0023
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
TTTTTTTTTT (
433
)
13.7
0.0137
P8 GC+1d culture
ATCTGACTCC
(
2
)
3.4
0.0034
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
TTTTTTTTTT (
433
)
5.9
0.0059
P8 GC+SHH+1d culture
ATCTGACTCC
(
2
)
2.3
0.0023
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
TTTTTTTTTT (
433
)
4.9
0.0049
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
ATCTGACTCC
(
2
)
4.5
0.0045
P1 cortex
TTTTTTTTTT (
433
)
4.5
0.0045
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
TTTTTTTTTT (
433
)
7.2
0.0072
Hypothalamus
TGCAATTAGG (
3
)
1.8
0.0018
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
ATCTGACTCC
(
2
)
9.4
0.0094
E12.5 retina
TTTTTTTTTT (
433
)
7.5
0.0075
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
TTTTTTTTTT (
433
)
23.7
0.0237
E14.5 retina
ATCTGACTCC
(
2
)
9.1
0.0091
E14.5 retina
TGCAATTAGG (
3
)
3.6
0.0036
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
TTTTTTTTTT (
433
)
5.4
0.0054
E16.5 retina
ATCTGACTCC
(
2
)
3.6
0.0036
E16.5 retina
TGCAATTAGG (
3
)
3.6
0.0036
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
TTTTTTTTTT (
433
)
10.9
0.0109
E18.5 retina
TGCAATTAGG (
3
)
1.8
0.0018
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
TTTTTTTTTT (
433
)
9.8
0.0098
P0.5 retina
ATCTGACTCC
(
2
)
2
0.002
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
TTTTTTTTTT (
433
)
7
0.007
P2.5 retina
ATCTGACTCC
(
2
)
1.8
0.0018
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
TTTTTTTTTT (
433
)
9.9
0.0099
P4.5 retina
ATCTGACTCC
(
2
)
2
0.002
P4.5 retina
TGCAATTAGG (
3
)
2
0.002
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
TTTTTTTTTT (
433
)
8.3
0.0083
P6.5 retina
ATCTGACTCC
(
2
)
1.7
0.0017
P6.5 retina
TGCAATTAGG (
3
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
ATCTGACTCC
(
2
)
1.9
0.0019
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
TTTTTTTTTT (
433
)
3.8
0.0038
P10.5 crx+ retina
ATCTGACTCC
(
2
)
1.9
0.0019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
TTTTTTTTTT (
433
)
7.4
0.0074
Adult retinal
ATCTGACTCC
(
2
)
3.7
0.0037
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
ATCTGACTCC
(
2
)
3.8
0.0038
ONL
TTTTTTTTTT (
433
)
3.8
0.0038
