Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.261602	Hic2	hypermethylated in cancer 2	16		58180
Gene Ontology	DNA binding | nucleic acid binding | nucleus | protein binding | regulation of transcription, DNA-dependent | zinc ion binding
Human Homolog	HIC2[hypermethylated in cancer 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGGTGCTGG (64) 8.2 0.0082 P8 Cb GC GTGGAGAACT (3) 3.3 0.0033 P8 Cb GC CAGCAGTGAG (2) 1.6 0.0016 P8 Cb GC GTGGGGAGCC (8) 1.6 0.0016 P8 Cb GC TAGAGAAAAA (2) 1.6 0.0016 P8 Cb GC TGGGTGCCAG 1.6 0.0016 Cb medulloblastoma TGGGTGCTGG (64) 9.2 0.0092 Cb medulloblastoma GTGGGGAGCC (8) 6.9 0.0069 Cb medulloblastoma CACGTACCCT (2) 2.3 0.0023 Cb medulloblastoma TGGGTGCCAG 2.3 0.0023 P8 GC+1d culture GTGGGGAGCC (8) 8 0.008 P8 GC+1d culture TGGGTGCTGG (64) 5.7 0.0057 P8 GC+1d culture GTGGAGAACT (3) 3.4 0.0034 P8 GC+1d culture ACTAATCTCT 1.1 0.0011 P8 GC+1d culture GTCAGCTCCA (2) 1.1 0.0011 P8 GC+1d culture TAGAGAAAAA (2) 1.1 0.0011 P8 GC+1d culture TGGGTGCCAG 1.1 0.0011 P8 GC+SHH+1d culture GTGGGGAGCC (8) 3.5 0.0035 P8 GC+SHH+1d culture TGGGTGCTGG (64) 3.5 0.0035 P8 GC+SHH+1d culture CACGTACCCT (2) 2.3 0.0023 P8 GC+SHH+1d culture CAGCAGTGAG (2) 2.3 0.0023 P8 GC+SHH+1d culture GTGGAGAACT (3) 1.2 0.0012 P8 GC+SHH+1d culture TGCGTGTGTG (16) 1.2 0.0012 3T3 fibroblasts TGGGTGCTGG (64) 17.5 0.0175 3T3 fibroblasts GTCAGCTCCA (2) 3.5 0.0035 3T3 fibroblasts TGCGTGTGTG (16) 3.5 0.0035 E15 cortex GTGGGGAGCC (8) 29.7 0.0297 E15 cortex TGGGTGCTGG (64) 14.8 0.0148 P1 cortex TGGGTGCTGG (64) 13.6 0.0136 P1 cortex CACCAAGCTG 4.5 0.0045 P1 cortex TAGAGAAAAA (2) 4.5 0.0045 Hypothalamus TGGGTGCTGG (64) 9.1 0.0091 Hypothalamus CGCGCGCACA (7) 1.8 0.0018 E12.5 retina TGGGTGCTGG (64) 9.4 0.0094 E12.5 retina GTGGAGAACT (3) 3.8 0.0038 E12.5 retina ACTAATCTCT 1.9 0.0019 E12.5 retina CGCGCGCACA (7) 1.9 0.0019 E12.5 retina GTGGGGAGCC (8) 1.9 0.0019 E14.5 retina TGGGTGCTGG (64) 54.7 0.0547 E14.5 retina CGCGCGCACA (7) 1.8 0.0018 E14.5 retina GAAACCAGGC (5) 1.8 0.0018 E14.5 retina GATGTGGAAG (2) 1.8 0.0018 E14.5 retina GTGGAGAACT (3) 1.8 0.0018 E14.5 retina TGCGTGTGTG (16) 1.8 0.0018 E16.5 retina TGGGTGCTGG (64) 41.7 0.0417 E16.5 retina GTGGAGAACT (3) 5.4 0.0054 E16.5 retina TAGAGAAAAA (2) 3.6 0.0036 E16.5 retina GAAACCAGGC (5) 1.8 0.0018 E16.5 retina GTGGGGAGCC (8) 1.8 0.0018 E16.5 retina TGGGTGCCAG 1.8 0.0018 E18.5 retina TGGGTGCTGG (64) 20 0.02 E18.5 retina GTGGGGAGCC (8) 5.5 0.0055 E18.5 retina GTGGAGAACT (3) 1.8 0.0018 P0.5 retina TGGGTGCTGG (64) 11.8 0.0118 P0.5 retina GATGTGGAAG (2) 3.9 0.0039 P0.5 retina GTGGAGAACT (3) 2 0.002 P0.5 retina GTGGGGAGCC (8) 2 0.002 P0.5 retina TGCGTGTGTG (16) 2 0.002 P2.5 retina TGGGTGCTGG (64) 17.6 0.0176 P2.5 retina GTGGAGAACT (3) 5.3 0.0053 P2.5 retina ACTAATCTCT 1.8 0.0018 P2.5 retina GTGGGGAGCC (8) 1.8 0.0018 P2.5 retina TGCGTGTGTG (16) 1.8 0.0018 P4.5 retina TGGGTGCTGG (64) 9.9 0.0099 P4.5 retina GTGGAGAACT (3) 4 0.004 P4.5 retina GTGGGGAGCC (8) 4 0.004 P4.5 retina GAAACCAGGC (5) 2 0.002 P6.5 retina TGGGTGCTGG (64) 13.3 0.0133 P6.5 retina GTGGGGAGCC (8) 3.3 0.0033 P6.5 retina CACGTACCCT (2) 1.7 0.0017 P6.5 retina CGCGCGCACA (7) 1.7 0.0017 P6.5 retina GTGGAGAACT (3) 1.7 0.0017 P6.5 retina TGCGTGTGTG (16) 1.7 0.0017 P10.5 crx- retina TGGGTGCTGG (64) 20.4 0.0204 P10.5 crx- retina GTGGAGAACT (3) 3.7 0.0037 P10.5 crx- retina ACTAATCTCT 1.9 0.0019 P10.5 crx- retina CACCAAGCTG 1.9 0.0019 P10.5 crx+ retina TGGGTGCTGG (64) 15.4 0.0154 P10.5 crx+ retina GTGGAGAACT (3) 3.8 0.0038 P10.5 crx+ retina GAAACCAGGC (5) 1.9 0.0019 Adult retinal TGGGTGCTGG (64) 13 0.013 Adult retinal CGCGCGCACA (7) 5.6 0.0056 Adult retinal ACTAATCTCT 1.9 0.0019 Adult retinal GTCAGCTCCA (2) 1.9 0.0019 Adult retinal GTGGAGAACT (3) 1.9 0.0019 ONL TGGGTGCTGG (64) 40.2 0.0402 ONL CACCAAGCTG 1.9 0.0019 ONL CGCGCGCACA (7) 1.9 0.0019 ONL GTGGAGAACT (3) 1.9 0.0019 ONL TAGAGAAAAA (2) 1.9 0.0019 ONL TGCGTGTGTG (16) 1.9 0.0019