Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.261606	Zdhhc4	zinc finger, DHHC domain containing 4	5		72881
Gene Ontology	integral to membrane | metal ion binding
Human Homolog	ZDHHC4[zinc finger, DHHC domain containing 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC GCCTTTGGTG (9) 1.6 0.0016 P8 Cb GC GCTGCCACCA (5) 1.6 0.0016 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma GCTGCCACCA (5) 2.3 0.0023 Cb medulloblastoma TGGACAACCT (5) 2.3 0.0023 Cb medulloblastoma TGTGCATCCT (3) 2.3 0.0023 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture CTCCTGGCTG (4) 2.3 0.0023 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture CTCCTGGCTG (4) 1.2 0.0012 P8 GC+SHH+1d culture GCTGCCACCA (5) 1.2 0.0012 P8 GC+SHH+1d culture TTTCTTGGTC 1.2 0.0012 3T3 fibroblasts GCTGCCACCA (5) 38.6 0.0386 3T3 fibroblasts CTCCTGGCTG (4) 10.5 0.0105 3T3 fibroblasts TGTGCATCCT (3) 3.5 0.0035 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex GCTGCCACCA (5) 19.8 0.0198 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex GCTGCCACCA (5) 9.1 0.0091 Hypothalamus GAAAAAAAAA (204) 67 0.067 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina CTCCTGGCTG (4) 1.9 0.0019 E12.5 retina TTTCTTGGTC 1.9 0.0019 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina CTCCTGGCTG (4) 1.8 0.0018 E14.5 retina GCCTTTGGTG (9) 1.8 0.0018 E14.5 retina TGTGCATCCT (3) 1.8 0.0018 E14.5 retina TTTCTTGGTC 1.8 0.0018 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina CTCCTGGCTG (4) 1.8 0.0018 E16.5 retina GCTGCCACCA (5) 1.8 0.0018 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina CTCCTGGCTG (4) 3.9 0.0039 P0.5 retina GCCTTTGGTG (9) 2 0.002 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina TGGCTTCTTG (2) 5.3 0.0053 P2.5 retina GCTGCCACCA (5) 3.5 0.0035 P2.5 retina GCCTTTGGTG (9) 1.8 0.0018 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina TGGCTTCTTG (2) 5.9 0.0059 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina TGGCTTCTTG (2) 3.3 0.0033 P6.5 retina GCCTTTGGTG (9) 1.7 0.0017 P6.5 retina GCTGCCACCA (5) 1.7 0.0017 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina CTCCTGGCTG (4) 1.9 0.0019 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina TGGCTTCTTG (2) 3.8 0.0038 P10.5 crx+ retina CTCCTGGCTG (4) 1.9 0.0019 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal CTCCTGGCTG (4) 1.9 0.0019 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL TGGCTTCTTG (2) 3.8 0.0038 ONL CTCCTGGCTG (4) 1.9 0.0019 ONL TGGACAACCT (5) 1.9 0.0019