Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.261679	Rps26	ribosomal protein S26	10		27370
Gene Ontology	intracellular | protein biosynthesis | ribosome | structural constituent of ribosome
Human Homolog	RPS26[ribosomal protein S26]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 169 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAGAGGCC (3) 231.7 0.2317 P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC AGAAAAAAAA (47) 17.9 0.0179 P8 Cb GC CGCTCACCAA (2) 3.3 0.0033 P8 Cb GC GTGGGGCGGG (2) 3.3 0.0033 P8 Cb GC GTTTGTGTCT (2) 3.3 0.0033 P8 Cb GC GGCACCTCGG (2) 1.6 0.0016 P8 Cb GC GGCTTTGGTG (9) 1.6 0.0016 P8 Cb GC TACAGAGGCC (2) 1.6 0.0016 P8 Cb GC TTAAGAGGCC 1.6 0.0016 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma TAAAGAGGCC (3) 67.1 0.0671 Cb medulloblastoma AGAAAAAAAA (47) 53.2 0.0532 Cb medulloblastoma GTGGGGCGGG (2) 9.2 0.0092 Cb medulloblastoma GGCTTTGGTG (9) 2.3 0.0023 Cb medulloblastoma GTTTGTGTCT (2) 2.3 0.0023 Cb medulloblastoma TAGAGAGGCC 2.3 0.0023 P8 GC+1d culture TAAAGAGGCC (3) 171.2 0.1712 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture AGAAAAAAAA (47) 8 0.008 P8 GC+1d culture GTGGGGCGGG (2) 5.7 0.0057 P8 GC+1d culture GGACGCCCAA (2) 4.6 0.0046 P8 GC+1d culture TGCAGCCCAT (3) 3.4 0.0034 P8 GC+1d culture GCCGCGGCCC (3) 2.3 0.0023 P8 GC+1d culture CAGGAGGAGG (10) 1.1 0.0011 P8 GC+1d culture GCACTTAAGG (2) 1.1 0.0011 P8 GC+1d culture TAAAGAGCCC (2) 1.1 0.0011 P8 GC+1d culture TTTACACTTC (2) 1.1 0.0011 P8 GC+SHH+1d culture TAAAGAGGCC (3) 201.4 0.2014 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture AGAAAAAAAA (47) 14.1 0.0141 P8 GC+SHH+1d culture GCCGCGGCCC (3) 8.2 0.0082 P8 GC+SHH+1d culture GTGGGGCGGG (2) 5.9 0.0059 P8 GC+SHH+1d culture GGACGCCCAA (2) 4.7 0.0047 P8 GC+SHH+1d culture GGCTTTGGTG (9) 3.5 0.0035 P8 GC+SHH+1d culture TTTACACTTC (2) 3.5 0.0035 P8 GC+SHH+1d culture GTTTGTGTCT (2) 2.3 0.0023 P8 GC+SHH+1d culture TGCAGCCCAT (3) 2.3 0.0023 P8 GC+SHH+1d culture TAGAGAGGCC 1.2 0.0012 3T3 fibroblasts TAAAGAGGCC (3) 234.8 0.2348 3T3 fibroblasts GGACGCCCAA (2) 24.5 0.0245 3T3 fibroblasts GCCGCGGCCC (3) 21 0.021 3T3 fibroblasts GGCTTTGGTG (9) 14 0.014 3T3 fibroblasts AGAAAAAAAA (47) 3.5 0.0035 3T3 fibroblasts TGCAGCCCAT (3) 3.5 0.0035 E15 cortex TAAAGAGGCC (3) 108.9 0.1089 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex AGAAAAAAAA (47) 14.8 0.0148 E15 cortex GTGGGGCGGG (2) 9.9 0.0099 E15 cortex GTTTGTGTCT (2) 4.9 0.0049 E15 cortex TAAAGAGCCC (2) 4.9 0.0049 E15 cortex TGCAGCCCAT (3) 4.9 0.0049 E15 cortex TTTACACTTC (2) 4.9 0.0049 P1 cortex TAAAGAGGCC (3) 113.6 0.1136 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex GGACGCCCAA (2) 13.6 0.0136 P1 cortex AGAAAAAAAA (47) 9.1 0.0091 P1 cortex TTAAGAGGCC 4.5 0.0045 Hypothalamus TAAAGAGGCC (3) 105 0.105 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus AGAAAAAAAA (47) 32.6 0.0326 Hypothalamus GCCGCGGCCC (3) 7.2 0.0072 Hypothalamus GGCTTTGGTG (9) 7.2 0.0072 Hypothalamus GTGGGGCGGG (2) 5.4 0.0054 Hypothalamus TGCAGCCCAT (3) 3.6 0.0036 Hypothalamus TAAAGAGCCC (2) 1.8 0.0018 E12.5 retina TAAAGAGGCC (3) 416.8 0.4168 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina AGAAAAAAAA (47) 20.7 0.0207 E12.5 retina GCCGCGGCCC (3) 15 0.015 E12.5 retina GGCTTTGGTG (9) 7.5 0.0075 E12.5 retina GTTTGTGTCT (2) 3.8 0.0038 E12.5 retina CAGGAGGAGG (10) 1.9 0.0019 E12.5 retina GTGGGGCGGG (2) 1.9 0.0019 E12.5 retina TAGAGAGGCC 1.9 0.0019 E12.5 retina TTTACACTTC (2) 1.9 0.0019 E14.5 retina TAAAGAGGCC (3) 233.2 0.2332 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina AGAAAAAAAA (47) 20 0.02 E14.5 retina GGCTTTGGTG (9) 16.4 0.0164 E14.5 retina GCCGCGGCCC (3) 3.6 0.0036 E14.5 retina TGCAGCCCAT (3) 3.6 0.0036 E16.5 retina TAAAGAGGCC (3) 199.2 0.1992 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina GGCTTTGGTG (9) 18.1 0.0181 E16.5 retina TGCAGCCCAT (3) 12.7 0.0127 E16.5 retina AGAAAAAAAA (47) 10.9 0.0109 E16.5 retina GCCGCGGCCC (3) 10.9 0.0109 E16.5 retina GTTTGTGTCT (2) 3.6 0.0036 E18.5 retina TAAAGAGGCC (3) 285.6 0.2856 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina AGAAAAAAAA (47) 29.1 0.0291 E18.5 retina GCCGCGGCCC (3) 12.7 0.0127 E18.5 retina GTTTGTGTCT (2) 5.5 0.0055 E18.5 retina TAAAGAGTCC 5.5 0.0055 E18.5 retina GTGGGGCGGG (2) 3.6 0.0036 E18.5 retina GCACTTAAGG (2) 1.8 0.0018 E18.5 retina TAAAGAGCCC (2) 1.8 0.0018 E18.5 retina TACAGAGGCC (2) 1.8 0.0018 E18.5 retina TAGAGAGGCC 1.8 0.0018 E18.5 retina TGCAGCCCAT (3) 1.8 0.0018 E18.5 retina TTTACACTTC (2) 1.8 0.0018 P0.5 retina TAAAGAGGCC (3) 200.2 0.2002 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina AGAAAAAAAA (47) 13.7 0.0137 P0.5 retina GGCTTTGGTG (9) 9.8 0.0098 P0.5 retina GCCGCGGCCC (3) 2 0.002 P0.5 retina GGCACCTCGG (2) 2 0.002 P0.5 retina GTGGGGCGGG (2) 2 0.002 P0.5 retina GTTTGTGTCT (2) 2 0.002 P0.5 retina TTAAGAGGCC 2 0.002 P0.5 retina TTTACACTTC (2) 2 0.002 P2.5 retina TAAAGAGGCC (3) 216.5 0.2165 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina AGAAAAAAAA (47) 17.6 0.0176 P2.5 retina TTTACACTTC (2) 8.8 0.0088 P2.5 retina GTGGGGCGGG (2) 7 0.007 P2.5 retina GCCGCGGCCC (3) 5.3 0.0053 P2.5 retina GCACTTAAGG (2) 3.5 0.0035 P2.5 retina GGACGCCCAA (2) 1.8 0.0018 P2.5 retina TAGAGAGGCC 1.8 0.0018 P2.5 retina TTAAGAGGCC 1.8 0.0018 P4.5 retina TAAAGAGGCC (3) 186.2 0.1862 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina AGAAAAAAAA (47) 31.7 0.0317 P4.5 retina GCCGCGGCCC (3) 5.9 0.0059 P4.5 retina GGACGCCCAA (2) 2 0.002 P4.5 retina GGCACCTCGG (2) 2 0.002 P4.5 retina GGCTTTGGTG (9) 2 0.002 P4.5 retina GTGGGGCGGG (2) 2 0.002 P4.5 retina TTAAGAGGCC 2 0.002 P6.5 retina TAAAGAGGCC (3) 121.7 0.1217 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina AGAAAAAAAA (47) 13.3 0.0133 P6.5 retina GTGGGGCGGG (2) 6.7 0.0067 P6.5 retina GCCGCGGCCC (3) 5 0.005 P6.5 retina TTTACACTTC (2) 3.3 0.0033 P6.5 retina CAGGAGGAGG (10) 1.7 0.0017 P6.5 retina GCACTTAAGG (2) 1.7 0.0017 P6.5 retina GGACGCCCAA (2) 1.7 0.0017 P10.5 crx- retina TAAAGAGGCC (3) 53.9 0.0539 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina AGAAAAAAAA (47) 7.4 0.0074 P10.5 crx- retina GGCTTTGGTG (9) 3.7 0.0037 P10.5 crx- retina GCACTTAAGG (2) 1.9 0.0019 P10.5 crx- retina GTTTGTGTCT (2) 1.9 0.0019 P10.5 crx+ retina TAAAGAGGCC (3) 84.6 0.0846 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina AGAAAAAAAA (47) 5.8 0.0058 P10.5 crx+ retina GGCTTTGGTG (9) 5.8 0.0058 P10.5 crx+ retina TAGAGAGGCC 5.8 0.0058 P10.5 crx+ retina CAGGAGGAGG (10) 1.9 0.0019 P10.5 crx+ retina GCACTTAAGG (2) 1.9 0.0019 P10.5 crx+ retina GCCGCGGCCC (3) 1.9 0.0019 P10.5 crx+ retina GTGGGGCGGG (2) 1.9 0.0019 P10.5 crx+ retina GTTTGTGTCT (2) 1.9 0.0019 Adult retinal TAAAGAGGCC (3) 42.6 0.0426 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal AGAAAAAAAA (47) 5.6 0.0056 Adult retinal CAGGAGGAGG (10) 1.9 0.0019 Adult retinal CGCTCACCAA (2) 1.9 0.0019 Adult retinal GGACGCCCAA (2) 1.9 0.0019 Adult retinal GTTTGTGTCT (2) 1.9 0.0019 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL TAAAGAGGCC (3) 21.1 0.0211 ONL AGAAAAAAAA (47) 19.2 0.0192 ONL GTTTGTGTCT (2) 1.9 0.0019 ONL TACAGAGGCC (2) 1.9 0.0019 ONL TGCAGCCCAT (3) 1.9 0.0019