Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.261780
BC029214
cDNA sequence BC029214
2
227622
Human Homolog
LOC286257[hypothetical protein LOC286257]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 46 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGAAACCAG (
7
)
57.1
0.0571
P8 Cb GC
CCAACAGAGT
(
2
)
1.6
0.0016
P8 Cb GC
TATGCAAGCT
1.6
0.0016
Cb medulloblastoma
AAGAAACCAG (
7
)
30.1
0.0301
Cb medulloblastoma
TGGACAGAGT
(
2
)
2.3
0.0023
P8 GC+1d culture
AAGAAACCAG (
7
)
49.1
0.0491
P8 GC+1d culture
CCAACAGAGT
(
2
)
2.3
0.0023
P8 GC+1d culture
TATGCAACCT
(
2
)
2.3
0.0023
P8 GC+1d culture
CTTTTGCAGA
(
2
)
1.1
0.0011
P8 GC+1d culture
TGGACAGAGT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
AAGAAACCAG (
7
)
51.5
0.0515
P8 GC+SHH+1d culture
TATGCAACCT
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
CCAACAGAGT
(
2
)
1.2
0.0012
3T3 fibroblasts
AAGAAACCAG (
7
)
7
0.007
3T3 fibroblasts
CCAACAGAGT
(
2
)
3.5
0.0035
E15 cortex
AAGAAACCAG (
7
)
9.9
0.0099
E15 cortex
CCAACAGAGT
(
2
)
4.9
0.0049
E15 cortex
TATGCAAGCT
4.9
0.0049
P1 cortex
AAGAAACCAG (
7
)
22.7
0.0227
P1 cortex
CCAACAGAGT
(
2
)
4.5
0.0045
Hypothalamus
AAGAAACCAG (
7
)
21.7
0.0217
E12.5 retina
AAGAAACCAG (
7
)
54.4
0.0544
E14.5 retina
AAGAAACCAG (
7
)
54.7
0.0547
E14.5 retina
CCAACAGAGT
(
2
)
3.6
0.0036
E16.5 retina
AAGAAACCAG (
7
)
54.3
0.0543
E16.5 retina
TATGCAAGCT
1.8
0.0018
E18.5 retina
AAGAAACCAG (
7
)
14.6
0.0146
P0.5 retina
AAGAAACCAG (
7
)
27.5
0.0275
P0.5 retina
CTTTTGCAGA
(
2
)
2
0.002
P2.5 retina
AAGAAACCAG (
7
)
17.6
0.0176
P4.5 retina
AAGAAACCAG (
7
)
25.8
0.0258
P4.5 retina
CCAACAGAGT
(
2
)
2
0.002
P6.5 retina
AAGAAACCAG (
7
)
8.3
0.0083
P6.5 retina
CTTTTGCAGA
(
2
)
1.7
0.0017
P6.5 retina
TATGCAACCT
(
2
)
1.7
0.0017
P6.5 retina
TGGACAGAGT
(
2
)
1.7
0.0017
P10.5 crx- retina
AAGAAACCAG (
7
)
16.7
0.0167
P10.5 crx- retina
CCAACAGAGT
(
2
)
1.9
0.0019
P10.5 crx- retina
CTTTTGCAGA
(
2
)
1.9
0.0019
P10.5 crx- retina
TATGCAACCT
(
2
)
1.9
0.0019
P10.5 crx+ retina
AAGAAACCAG (
7
)
9.6
0.0096
P10.5 crx+ retina
TATGCAACCT
(
2
)
1.9
0.0019
Adult retinal
AAGAAACCAG (
7
)
3.7
0.0037
Adult retinal
CCAACAGAGT
(
2
)
1.9
0.0019
ONL
CCAACAGAGT
(
2
)
1.9
0.0019
ONL
CTTTTGCAGA
(
2
)
1.9
0.0019
