Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.261972	Rbm8	RNA binding motif protein 8	3		60365
Gene Ontology	cytoplasm | mRNA binding | mRNA processing | mRNA-nucleus export | nuclear mRNA splicing, via spliceosome | nucleus | RNA binding | RNA processing | transport
Human Homolog	RBM8A[RNA binding motif protein 8A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTAGCTCACA (30) 16.3 0.0163 P8 Cb GC ACAAATTCGC 1.6 0.0016 P8 Cb GC GAAGGACTAA (2) 1.6 0.0016 P8 Cb GC GAGACTGTTC (6) 1.6 0.0016 Cb medulloblastoma GTAGCTCACA (30) 18.5 0.0185 Cb medulloblastoma GAAGGACTAA (2) 4.6 0.0046 Cb medulloblastoma GATATTTTCT (4) 4.6 0.0046 Cb medulloblastoma GTTAAGTTCT (2) 4.6 0.0046 P8 GC+1d culture GTAGCTCACA (30) 27.4 0.0274 P8 GC+1d culture GAAGGACTAA (2) 4.6 0.0046 P8 GC+1d culture AGGAAGGGTG (2) 1.1 0.0011 P8 GC+1d culture CCCTCTGAAG (3) 1.1 0.0011 P8 GC+1d culture GAGACTGTTC (6) 1.1 0.0011 P8 GC+1d culture GATATTTTCT (4) 1.1 0.0011 P8 GC+SHH+1d culture GTAGCTCACA (30) 15.2 0.0152 P8 GC+SHH+1d culture GAAGGACTAA (2) 9.4 0.0094 P8 GC+SHH+1d culture CCCTCTGAAG (3) 2.3 0.0023 P8 GC+SHH+1d culture GAGACTGTTC (6) 2.3 0.0023 P8 GC+SHH+1d culture AGGAAGGGTG (2) 1.2 0.0012 3T3 fibroblasts GTAGCTCACA (30) 14 0.014 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 E15 cortex GTAGCTCACA (30) 29.7 0.0297 E15 cortex GAAGGACTAA (2) 9.9 0.0099 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex GTAGCTCACA (30) 13.6 0.0136 Hypothalamus GTAGCTCACA (30) 29 0.029 Hypothalamus AGGAAGGGTG (2) 1.8 0.0018 Hypothalamus GAAGGACTAA (2) 1.8 0.0018 Hypothalamus GATATTTTCT (4) 1.8 0.0018 E12.5 retina GTAGCTCACA (30) 30 0.03 E12.5 retina GAAGGACTAA (2) 11.3 0.0113 E12.5 retina GAGACTGTTC (6) 3.8 0.0038 E14.5 retina GTAGCTCACA (30) 31 0.031 E14.5 retina AGGTCCTGAG 1.8 0.0018 E14.5 retina GAAGGACTAA (2) 1.8 0.0018 E16.5 retina GTAGCTCACA (30) 41.7 0.0417 E16.5 retina GAAGGACTAA (2) 7.2 0.0072 E16.5 retina GATATTTTCT (4) 1.8 0.0018 E18.5 retina GTAGCTCACA (30) 16.4 0.0164 P0.5 retina GTAGCTCACA (30) 25.5 0.0255 P0.5 retina ACAAATTCGC 3.9 0.0039 P0.5 retina GAAGGACTAA (2) 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina GAGACTGTTC (6) 2 0.002 P0.5 retina GTTAAGTTCT (2) 2 0.002 P2.5 retina GTAGCTCACA (30) 22.9 0.0229 P2.5 retina GAAGGACTAA (2) 1.8 0.0018 P2.5 retina GAGACTGTTC (6) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina GTAGCTCACA (30) 25.8 0.0258 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina GTAGCTCACA (30) 18.3 0.0183 P6.5 retina GAAGGACTAA (2) 3.3 0.0033 P6.5 retina GATATTTTCT (4) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina AGGAAGGGTG (2) 1.7 0.0017 P6.5 retina CCCTCTGAAG (3) 1.7 0.0017 P10.5 crx- retina GTAGCTCACA (30) 16.7 0.0167 P10.5 crx- retina GATATTTTCT (4) 1.9 0.0019 P10.5 crx- retina GTTAAGTTCT (2) 1.9 0.0019 P10.5 crx+ retina GTAGCTCACA (30) 28.8 0.0288 P10.5 crx+ retina AGGAAGGGTG (2) 1.9 0.0019 P10.5 crx+ retina GAAGGACTAA (2) 1.9 0.0019 P10.5 crx+ retina GTTAAGTTCT (2) 1.9 0.0019 Adult retinal GTAGCTCACA (30) 16.7 0.0167 Adult retinal GAAGGACTAA (2) 3.7 0.0037 Adult retinal AGGTCCTGAG 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL GTAGCTCACA (30) 24.9 0.0249 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AGGTCCTGAG 1.9 0.0019