Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.262096	AI551093	expressed sequence AI551093	18		106919
Mm.262096	Pggt1b	protein geranylgeranyltransferase type I, beta subunit	18		225467
Gene Ontology	catalytic activity | prenyltransferase activity | transferase activity
Human Homolog	PGGT1B[protein geranylgeranyltransferase type I, beta subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC GATATGAAGA (5) 3.3 0.0033 P8 Cb GC GGGCAGATTG (3) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma CTTTGCGTGC (2) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture GGGCAGATTG (3) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture CTTTGCGTGC (2) 3.5 0.0035 P8 GC+SHH+1d culture AGACATAAAG (6) 2.3 0.0023 P8 GC+SHH+1d culture GGGCAGATTG (3) 2.3 0.0023 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex CTTTGCGTGC (2) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina AGACATAAAG (6) 1.9 0.0019 E12.5 retina CTTTGCGTGC (2) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina CTTTGCGTGC (2) 3.6 0.0036 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina AGACATAAAG (6) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina AGACATAAAG (6) 2 0.002 P0.5 retina CTTTGCGTGC (2) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina CTTTGCGTGC (2) 4 0.004 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina CTTTGCGTGC (2) 3.3 0.0033 P6.5 retina GGGCAGATTG (3) 3.3 0.0033 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina CTTTGCGTGC (2) 3.7 0.0037 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina CTTTGCGTGC (2) 3.8 0.0038 Adult retinal CCTTTAATCC (355) 129.6 0.1296 ONL CCTTTAATCC (355) 84.3 0.0843