Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.262252
Serf2
small EDRK-rich factor 2
2
378702
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 117 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTCGAGTTTC
(
4
)
11.4
0.0114
P8 Cb GC
GGGATGGATG (
5
)
8.2
0.0082
P8 Cb GC
CAGCAGAAGC
(
9
)
4.9
0.0049
P8 Cb GC
GGAAATTAAA
(
4
)
4.9
0.0049
P8 Cb GC
AACAATATTT (
2
)
1.6
0.0016
P8 Cb GC
ATTTCCGAGC (
2
)
1.6
0.0016
P8 Cb GC
GGGATGGAGG
(
6
)
1.6
0.0016
Cb medulloblastoma
GGAAATTAAA
(
4
)
20.8
0.0208
Cb medulloblastoma
ATTTCCGAGC (
2
)
13.9
0.0139
Cb medulloblastoma
CTCGAGTTTC
(
4
)
13.9
0.0139
Cb medulloblastoma
GATGAGGTGG (
4
)
2.3
0.0023
Cb medulloblastoma
GGGATGGATG (
5
)
2.3
0.0023
P8 GC+1d culture
CTCGAGTTTC
(
4
)
17.1
0.0171
P8 GC+1d culture
GGGATGGATG (
5
)
13.7
0.0137
P8 GC+1d culture
ATTTCCGAGC (
2
)
4.6
0.0046
P8 GC+1d culture
GGAAATTAAA
(
4
)
3.4
0.0034
P8 GC+1d culture
TGACTCACCA
(
2
)
3.4
0.0034
P8 GC+1d culture
GGGATGGAGG
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
GGGATGGATG (
5
)
12.9
0.0129
P8 GC+SHH+1d culture
CTCGAGTTTC
(
4
)
7
0.007
P8 GC+SHH+1d culture
GGAAATTAAA
(
4
)
7
0.007
P8 GC+SHH+1d culture
CAGCAGAAGC
(
9
)
4.7
0.0047
P8 GC+SHH+1d culture
ATTTCCGAGC (
2
)
2.3
0.0023
P8 GC+SHH+1d culture
TGACTCACCA
(
2
)
2.3
0.0023
3T3 fibroblasts
CTCGAGTTTC
(
4
)
28
0.028
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
TGACTCACCA
(
2
)
7
0.007
3T3 fibroblasts
GGGATGGAGG
(
6
)
3.5
0.0035
3T3 fibroblasts
GGGATGGATG (
5
)
3.5
0.0035
E15 cortex
CTCGAGTTTC
(
4
)
14.8
0.0148
E15 cortex
GGAAATTAAA
(
4
)
9.9
0.0099
E15 cortex
GGGATGGATG (
5
)
9.9
0.0099
E15 cortex
CAGCAGAAGC
(
9
)
4.9
0.0049
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
GGAAATTAAA
(
4
)
9.1
0.0091
P1 cortex
AAAAAGCAAA (
3
)
4.5
0.0045
Hypothalamus
GGAAATTAAA
(
4
)
10.9
0.0109
Hypothalamus
CAGCAGAAGC
(
9
)
7.2
0.0072
Hypothalamus
CTCGAGTTTC
(
4
)
3.6
0.0036
Hypothalamus
GGGATGGATG (
5
)
3.6
0.0036
Hypothalamus
ATTTCCGAGC (
2
)
1.8
0.0018
Hypothalamus
GATGAGGTGG (
4
)
1.8
0.0018
E12.5 retina
GGGATGGATG (
5
)
20.7
0.0207
E12.5 retina
CTCGAGTTTC
(
4
)
7.5
0.0075
E12.5 retina
TGACTCACCA
(
2
)
5.6
0.0056
E12.5 retina
ATTTCCGAGC (
2
)
1.9
0.0019
E12.5 retina
CTCGAGTTTT
(
3
)
1.9
0.0019
E12.5 retina
GGGATGGAGG
(
6
)
1.9
0.0019
E14.5 retina
GGGATGGATG (
5
)
7.3
0.0073
E14.5 retina
CTCGAGTTTC
(
4
)
3.6
0.0036
E14.5 retina
GGAAATTAAA
(
4
)
3.6
0.0036
E14.5 retina
CAGCAGAAGC
(
9
)
1.8
0.0018
E16.5 retina
GGGATGGATG (
5
)
14.5
0.0145
E16.5 retina
GGAAATTAAA
(
4
)
5.4
0.0054
E16.5 retina
AACAATATTT (
2
)
3.6
0.0036
E16.5 retina
CAGCAGAAGC
(
9
)
3.6
0.0036
E16.5 retina
ATTTCCGAGC (
2
)
1.8
0.0018
E18.5 retina
CTCGAGTTTC
(
4
)
10.9
0.0109
E18.5 retina
GGGATGGATG (
5
)
9.1
0.0091
E18.5 retina
AAAAAGCAAA (
3
)
3.6
0.0036
E18.5 retina
CAGCAGAAGC
(
9
)
3.6
0.0036
E18.5 retina
GGAAATTAAA
(
4
)
1.8
0.0018
P0.5 retina
CTCGAGTTTC
(
4
)
15.7
0.0157
P0.5 retina
GGAAATTAAA
(
4
)
9.8
0.0098
P0.5 retina
GGGATGGATG (
5
)
5.9
0.0059
P0.5 retina
CAGCAGAAGC
(
9
)
3.9
0.0039
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
AAAAAGCAAA (
3
)
2
0.002
P2.5 retina
CTCGAGTTTC
(
4
)
12.3
0.0123
P2.5 retina
GGGATGGATG (
5
)
8.8
0.0088
P2.5 retina
GGAAATTAAA
(
4
)
5.3
0.0053
P2.5 retina
AAAAAGCAAA (
3
)
3.5
0.0035
P2.5 retina
ATTTCCGAGC (
2
)
1.8
0.0018
P2.5 retina
CAGCAGAAGC
(
9
)
1.8
0.0018
P2.5 retina
CTCGAGTTTT
(
3
)
1.8
0.0018
P2.5 retina
GGGATGGAGG
(
6
)
1.8
0.0018
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P4.5 retina
GGGATGGATG (
5
)
39.6
0.0396
P4.5 retina
GGAAATTAAA
(
4
)
13.9
0.0139
P4.5 retina
CTCGAGTTTC
(
4
)
5.9
0.0059
P4.5 retina
AGGATTGACA
2
0.002
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P6.5 retina
GGGATGGATG (
5
)
26.7
0.0267
P6.5 retina
CTCGAGTTTC
(
4
)
13.3
0.0133
P6.5 retina
GGAAATTAAA
(
4
)
5
0.005
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
ATTTCCGAGC (
2
)
1.7
0.0017
P6.5 retina
GGGATGGAGG
(
6
)
1.7
0.0017
P10.5 crx- retina
CTCGAGTTTC
(
4
)
11.1
0.0111
P10.5 crx- retina
ATTTCCGAGC (
2
)
5.6
0.0056
P10.5 crx- retina
GGGATGGATG (
5
)
5.6
0.0056
P10.5 crx- retina
TGACTCACCA
(
2
)
5.6
0.0056
P10.5 crx- retina
GGAAATTAAA
(
4
)
3.7
0.0037
P10.5 crx- retina
GATGAGGTGG (
4
)
1.9
0.0019
P10.5 crx- retina
GGGATGGAGG
(
6
)
1.9
0.0019
P10.5 crx+ retina
GGAAATTAAA
(
4
)
13.5
0.0135
P10.5 crx+ retina
GGGATGGATG (
5
)
11.5
0.0115
P10.5 crx+ retina
CTCGAGTTTC
(
4
)
9.6
0.0096
P10.5 crx+ retina
AGGATTGACA
7.7
0.0077
P10.5 crx+ retina
AACAATATTT (
2
)
1.9
0.0019
P10.5 crx+ retina
CTCGAGTTTT
(
3
)
1.9
0.0019
P10.5 crx+ retina
GATGAGGTGG (
4
)
1.9
0.0019
P10.5 crx+ retina
TGACTCACCA
(
2
)
1.9
0.0019
Adult retinal
GGGATGGATG (
5
)
9.3
0.0093
Adult retinal
AGGATTGACA
3.7
0.0037
Adult retinal
CTCGAGTTTC
(
4
)
3.7
0.0037
Adult retinal
ATTTCCGAGC (
2
)
1.9
0.0019
Adult retinal
GGGATGGAGG
(
6
)
1.9
0.0019
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
Adult retinal
TGACTCACCA
(
2
)
1.9
0.0019
ONL
CTCGAGTTTC
(
4
)
11.5
0.0115
ONL
AGGATTGACA
5.7
0.0057
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
TGACTCACCA
(
2
)
3.8
0.0038
ONL
ATTTCCGAGC (
2
)
1.9
0.0019
ONL
GGGATGGAGG
(
6
)
1.9
0.0019
ONL
GGGATGGATG (
5
)
1.9
0.0019
