Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.262300
BC003940
cDNA sequence BC003940
11
192173
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTTTTTTTTT (
433
)
4.9
0.0049
P8 Cb GC
TGGGGAGCTC
(
2
)
1.6
0.0016
Cb medulloblastoma
TGGGGAGCTC
(
2
)
4.6
0.0046
Cb medulloblastoma
GAGACTTGCT
2.3
0.0023
Cb medulloblastoma
TTTTTTTTTT (
433
)
2.3
0.0023
P8 GC+1d culture
TTTTTTTTTT (
433
)
13.7
0.0137
P8 GC+1d culture
TGGGGAGCTC
(
2
)
6.8
0.0068
P8 GC+SHH+1d culture
TGGGGAGCTC
(
2
)
12.9
0.0129
P8 GC+SHH+1d culture
TTTTTTTTTT (
433
)
5.9
0.0059
P8 GC+SHH+1d culture
CCTTGCCCCT
(
5
)
1.2
0.0012
3T3 fibroblasts
TGGGGAGCTC
(
2
)
10.5
0.0105
E15 cortex
TGGGGAGCTC
(
2
)
34.6
0.0346
E15 cortex
TTTTTTTTTT (
433
)
4.9
0.0049
P1 cortex
TGGGGAGCTC
(
2
)
9.1
0.0091
P1 cortex
TTTTTTTTTT (
433
)
4.5
0.0045
Hypothalamus
TTTTTTTTTT (
433
)
7.2
0.0072
Hypothalamus
TGGGGAGCTC
(
2
)
5.4
0.0054
Hypothalamus
CCCTTGGCCC (
4
)
1.8
0.0018
Hypothalamus
CCTTGCCCCT
(
5
)
1.8
0.0018
E12.5 retina
TTTTTTTTTT (
433
)
7.5
0.0075
E12.5 retina
TGGGGAGCTC
(
2
)
5.6
0.0056
E14.5 retina
TTTTTTTTTT (
433
)
23.7
0.0237
E14.5 retina
TGGGGAGCTC
(
2
)
1.8
0.0018
E16.5 retina
TTTTTTTTTT (
433
)
5.4
0.0054
E16.5 retina
TGGGGAGCTC
(
2
)
3.6
0.0036
E16.5 retina
CCTTGCCCCT
(
5
)
1.8
0.0018
E16.5 retina
GAGACTTGCT
1.8
0.0018
E18.5 retina
TTTTTTTTTT (
433
)
10.9
0.0109
E18.5 retina
TGGGGAGCTC
(
2
)
1.8
0.0018
P0.5 retina
TGGGGAGCTC
(
2
)
11.8
0.0118
P0.5 retina
TTTTTTTTTT (
433
)
9.8
0.0098
P0.5 retina
CCCTTGGCCC (
4
)
2
0.002
P2.5 retina
TTTTTTTTTT (
433
)
7
0.007
P2.5 retina
GAGACTTGCT
1.8
0.0018
P2.5 retina
TGGGGAGCTC
(
2
)
1.8
0.0018
P4.5 retina
TTTTTTTTTT (
433
)
9.9
0.0099
P4.5 retina
TGGGGAGCTC
(
2
)
5.9
0.0059
P6.5 retina
TTTTTTTTTT (
433
)
8.3
0.0083
P6.5 retina
TGGGGAGCTC
(
2
)
5
0.005
P10.5 crx- retina
TGGGGAGCTC
(
2
)
3.7
0.0037
P10.5 crx+ retina
TGGGGAGCTC
(
2
)
11.5
0.0115
P10.5 crx+ retina
TTTTTTTTTT (
433
)
3.8
0.0038
Adult retinal
TTTTTTTTTT (
433
)
7.4
0.0074
Adult retinal
TGGGGAGCTC
(
2
)
5.6
0.0056
Adult retinal
CCCTTGGCCC (
4
)
1.9
0.0019
ONL
TGGGGAGCTC
(
2
)
3.8
0.0038
ONL
TTTTTTTTTT (
433
)
3.8
0.0038
