Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.262327	Vdac2	voltage-dependent anion channel 2	14	14 2.5 cM	22334
Gene Ontology	anion transport | integral to membrane | mitochondrial outer membrane | mitochondrion | outer membrane | porin activity | voltage-dependent anion channel porin activity | voltage-dependent ion-selective channel activity
Human Homolog	VDAC2[voltage-dependent anion channel 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 113 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAATATATG (3) 21.2 0.0212 P8 Cb GC CGACCAGCAG 11.4 0.0114 P8 Cb GC ACAAATTATG (5) 3.3 0.0033 P8 Cb GC GGTTAGCTGT (2) 3.3 0.0033 P8 Cb GC CAGCGGTGTG 1.6 0.0016 P8 Cb GC GAAATAAAAT (4) 1.6 0.0016 Cb medulloblastoma GAAATATATG (3) 50.9 0.0509 Cb medulloblastoma ACAAATTATG (5) 11.6 0.0116 Cb medulloblastoma CGACCAGCAG 9.2 0.0092 Cb medulloblastoma GAAATAAAAT (4) 9.2 0.0092 Cb medulloblastoma GGTCAGCTGT (8) 4.6 0.0046 Cb medulloblastoma TTTGTTTTAT (4) 4.6 0.0046 Cb medulloblastoma AGGAGGGAGG (7) 2.3 0.0023 Cb medulloblastoma GCACGGTTTT 2.3 0.0023 P8 GC+1d culture GAAATATATG (3) 37.7 0.0377 P8 GC+1d culture CGACCAGCAG 12.6 0.0126 P8 GC+1d culture ACAAATTATG (5) 8 0.008 P8 GC+1d culture GGTTAGCTGT (2) 4.6 0.0046 P8 GC+1d culture GAAATATATT (2) 1.1 0.0011 P8 GC+1d culture GGTCAGCTGT (8) 1.1 0.0011 P8 GC+SHH+1d culture GAAATATATG (3) 48 0.048 P8 GC+SHH+1d culture CGACCAGCAG 15.2 0.0152 P8 GC+SHH+1d culture ACAAATTATG (5) 10.5 0.0105 P8 GC+SHH+1d culture GGTTAGCTGT (2) 5.9 0.0059 P8 GC+SHH+1d culture AGACCAGCAG (2) 1.2 0.0012 P8 GC+SHH+1d culture GAAATAAAAT (4) 1.2 0.0012 P8 GC+SHH+1d culture TTTGTTTTAT (4) 1.2 0.0012 3T3 fibroblasts CGACCAGCAG 35 0.035 3T3 fibroblasts CAGCGGTGTG 3.5 0.0035 3T3 fibroblasts GGTTAGCTGT (2) 3.5 0.0035 E15 cortex CGACCAGCAG 4.9 0.0049 P1 cortex GAAATATATG (3) 27.3 0.0273 P1 cortex ACAAATTATG (5) 4.5 0.0045 P1 cortex CGACCAGCAG 4.5 0.0045 Hypothalamus GAAATATATG (3) 99.6 0.0996 Hypothalamus ACAAATTATG (5) 9.1 0.0091 Hypothalamus CGACCAGCAG 9.1 0.0091 Hypothalamus GGTTAGCTGT (2) 3.6 0.0036 Hypothalamus GAAATATATA (3) 1.8 0.0018 Hypothalamus TTTGTTTTAT (4) 1.8 0.0018 E12.5 retina GAAATATATG (3) 48.8 0.0488 E12.5 retina CGACCAGCAG 11.3 0.0113 E12.5 retina ACAAATTATG (5) 9.4 0.0094 E12.5 retina GAAATAAAAT (4) 9.4 0.0094 E12.5 retina GGTTAGCTGT (2) 3.8 0.0038 E12.5 retina AGGAGGGAGG (7) 1.9 0.0019 E14.5 retina GAAATATATG (3) 80.2 0.0802 E14.5 retina ACAAATTATG (5) 9.1 0.0091 E14.5 retina CGACCAGCAG 5.5 0.0055 E14.5 retina GAAATAAAAT (4) 5.5 0.0055 E14.5 retina GCACGGTTTT 1.8 0.0018 E14.5 retina GGTTAGCTGT (2) 1.8 0.0018 E14.5 retina TTTGTTTTAT (4) 1.8 0.0018 E16.5 retina GAAATATATG (3) 88.7 0.0887 E16.5 retina CGACCAGCAG 18.1 0.0181 E16.5 retina ACAAATTATG (5) 3.6 0.0036 E16.5 retina GAAATAAAAT (4) 3.6 0.0036 E16.5 retina GGTTAGCTGT (2) 3.6 0.0036 E16.5 retina CAGCGGTGTG 1.8 0.0018 E16.5 retina GAAATATATA (3) 1.8 0.0018 E16.5 retina GCACGGTTTT 1.8 0.0018 E16.5 retina TTTGTTTTAT (4) 1.8 0.0018 E18.5 retina GAAATATATG (3) 80 0.08 E18.5 retina ACAAATTATG (5) 12.7 0.0127 E18.5 retina CGACCAGCAG 10.9 0.0109 E18.5 retina GAAATAAAAT (4) 9.1 0.0091 E18.5 retina TTTGTTTTAT (4) 3.6 0.0036 E18.5 retina GAAATATATT (2) 1.8 0.0018 E18.5 retina GGTTAGCTGT (2) 1.8 0.0018 P0.5 retina CGACCAGCAG 23.6 0.0236 P0.5 retina GAAATATATG (3) 13.7 0.0137 P0.5 retina ACAAATTATG (5) 11.8 0.0118 P0.5 retina AGGAGGGAGG (7) 2 0.002 P0.5 retina GGTTAGCTGT (2) 2 0.002 P2.5 retina GAAATATATG (3) 47.5 0.0475 P2.5 retina CGACCAGCAG 15.8 0.0158 P2.5 retina ACAAATTATG (5) 1.8 0.0018 P2.5 retina AGACCAGCAG (2) 1.8 0.0018 P2.5 retina GAAATAAAAT (4) 1.8 0.0018 P2.5 retina GGTTAGCTGT (2) 1.8 0.0018 P4.5 retina GAAATATATG (3) 55.5 0.0555 P4.5 retina CGACCAGCAG 17.8 0.0178 P4.5 retina GAAATAAAAT (4) 15.9 0.0159 P4.5 retina ACAAATTATG (5) 7.9 0.0079 P4.5 retina GGTTAGCTGT (2) 2 0.002 P6.5 retina GAAATATATG (3) 73.4 0.0734 P6.5 retina CGACCAGCAG 11.7 0.0117 P6.5 retina ACAAATTATG (5) 8.3 0.0083 P6.5 retina GGTTAGCTGT (2) 6.7 0.0067 P6.5 retina GAAATAAAAT (4) 3.3 0.0033 P10.5 crx- retina GAAATATATG (3) 42.7 0.0427 P10.5 crx- retina ACAAATTATG (5) 7.4 0.0074 P10.5 crx- retina CGACCAGCAG 7.4 0.0074 P10.5 crx- retina GAAATAAAAT (4) 1.9 0.0019 P10.5 crx- retina GAAATATATT (2) 1.9 0.0019 P10.5 crx- retina GGTTAGCTGT (2) 1.9 0.0019 P10.5 crx+ retina GAAATATATG (3) 42.3 0.0423 P10.5 crx+ retina CGACCAGCAG 15.4 0.0154 P10.5 crx+ retina ACAAATTATG (5) 7.7 0.0077 P10.5 crx+ retina GAAATAAAAT (4) 3.8 0.0038 P10.5 crx+ retina AGACCAGCAG (2) 1.9 0.0019 P10.5 crx+ retina CAGCGGTGTG 1.9 0.0019 P10.5 crx+ retina TTTGTTTTAT (4) 1.9 0.0019 Adult retinal CGACCAGCAG 27.8 0.0278 Adult retinal GAAATATATG (3) 9.3 0.0093 Adult retinal ACAAATTATG (5) 5.6 0.0056 Adult retinal GGTTAGCTGT (2) 5.6 0.0056 Adult retinal GAAATAAAAT (4) 1.9 0.0019 ONL GAAATATATG (3) 26.8 0.0268 ONL CGACCAGCAG 9.6 0.0096 ONL GGTTAGCTGT (2) 7.7 0.0077 ONL ACAAATTATG (5) 5.7 0.0057 ONL GGTCAGCTGT (8) 1.9 0.0019