Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.262369
4921513J16Rik
RIKEN cDNA 4921513J16 gene
353207
Mm.262369
1700051C09Rik
RIKEN cDNA 1700051C09 gene
11
68107
Human Homolog
FLJ40137[hypothetical protein FLJ40137]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 57 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTGACTCACA (
25
)
14.7
0.0147
P8 Cb GC
TGGTTTAATA (
5
)
3.3
0.0033
P8 Cb GC
CATCCTTTCC
(
3
)
1.6
0.0016
P8 Cb GC
GCGTACTCTG
(
3
)
1.6
0.0016
P8 Cb GC
TTATTTTTTT (
7
)
1.6
0.0016
Cb medulloblastoma
GTGACTCACA (
25
)
25.4
0.0254
Cb medulloblastoma
TTATTTTTTT (
7
)
4.6
0.0046
Cb medulloblastoma
CATCCTTTCC
(
3
)
2.3
0.0023
P8 GC+1d culture
GTGACTCACA (
25
)
14.8
0.0148
P8 GC+1d culture
CATCCTTTCC
(
3
)
4.6
0.0046
P8 GC+1d culture
TTATTTTTTT (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
GTGACTCACA (
25
)
16.4
0.0164
P8 GC+SHH+1d culture
CATCCTTTCC
(
3
)
7
0.007
P8 GC+SHH+1d culture
TTATTTTTTT (
7
)
1.2
0.0012
3T3 fibroblasts
GTGACTCACA (
25
)
35
0.035
3T3 fibroblasts
CATCCTTTCC
(
3
)
10.5
0.0105
3T3 fibroblasts
GCGTACTCTG
(
3
)
3.5
0.0035
E15 cortex
GTGACTCACA (
25
)
19.8
0.0198
E15 cortex
CATCCTTTCC
(
3
)
4.9
0.0049
E15 cortex
CCTTTCCTTG
(
4
)
4.9
0.0049
E15 cortex
GCGTACTCTG
(
3
)
4.9
0.0049
E15 cortex
TTATTTTTTT (
7
)
4.9
0.0049
P1 cortex
GTGACTCACA (
25
)
13.6
0.0136
Hypothalamus
GTGACTCACA (
25
)
21.7
0.0217
Hypothalamus
CATCCTTTCC
(
3
)
1.8
0.0018
E12.5 retina
GTGACTCACA (
25
)
35.7
0.0357
E12.5 retina
CATCCTTTCC
(
3
)
7.5
0.0075
E14.5 retina
GTGACTCACA (
25
)
45.5
0.0455
E14.5 retina
CATCCTTTCC
(
3
)
1.8
0.0018
E14.5 retina
GCGTACTCTG
(
3
)
1.8
0.0018
E16.5 retina
GTGACTCACA (
25
)
29
0.029
E16.5 retina
GGGCTGAGTC
(
2
)
3.6
0.0036
E16.5 retina
CATCCTTTCC
(
3
)
1.8
0.0018
E16.5 retina
TTATTTTTTT (
7
)
1.8
0.0018
E18.5 retina
GTGACTCACA (
25
)
27.3
0.0273
E18.5 retina
GGGCTGAGTC
(
2
)
1.8
0.0018
P0.5 retina
GTGACTCACA (
25
)
29.4
0.0294
P0.5 retina
CATCCTTTCC
(
3
)
13.7
0.0137
P2.5 retina
GTGACTCACA (
25
)
24.6
0.0246
P2.5 retina
CATCCTTTCC
(
3
)
7
0.007
P2.5 retina
TACTTTTTTT (
5
)
1.8
0.0018
P2.5 retina
TGGTTTAATA (
5
)
1.8
0.0018
P4.5 retina
GTGACTCACA (
25
)
27.7
0.0277
P4.5 retina
GGGCTGAGTC
(
2
)
2
0.002
P6.5 retina
GTGACTCACA (
25
)
26.7
0.0267
P6.5 retina
CATCCTTTCC
(
3
)
5
0.005
P6.5 retina
GGGCTGAGTC
(
2
)
1.7
0.0017
P10.5 crx- retina
GTGACTCACA (
25
)
26
0.026
P10.5 crx- retina
CCTTTCCTTG
(
4
)
3.7
0.0037
P10.5 crx+ retina
GTGACTCACA (
25
)
30.8
0.0308
P10.5 crx+ retina
CATCCTTTCC
(
3
)
7.7
0.0077
Adult retinal
GTGACTCACA (
25
)
33.3
0.0333
Adult retinal
CATCCTTTCC
(
3
)
5.6
0.0056
Adult retinal
GCGTACTCTG
(
3
)
1.9
0.0019
ONL
GTGACTCACA (
25
)
34.5
0.0345
ONL
TACTTTTTTT (
5
)
3.8
0.0038
ONL
GGGCTGAGTC
(
2
)
1.9
0.0019
