Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.263539	2210420L05Rik	RIKEN cDNA 2210420L05 gene	10		78384
Mm.263539	Pah	phenylalanine hydroxylase	10	10 47.0 cM	18478
Gene Ontology	amino acid binding | aromatic amino acid family metabolism | catalytic activity | iron ion binding | metabolism | monooxygenase activity | oxidoreductase activity | phenylalanine 4-monooxygenase activity | phenylalanine catabolism
Human Homolog	PAH[phenylalanine hydroxylase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGGCTTTCA (6) 22.8 0.0228 P8 Cb GC TACACACCTG (4) 8.2 0.0082 Cb medulloblastoma CTGGCTTTCA (6) 9.2 0.0092 Cb medulloblastoma GAACCAGAAA (4) 4.6 0.0046 Cb medulloblastoma CCCAGCTTTT (11) 2.3 0.0023 Cb medulloblastoma GCAGCTGTTG (5) 2.3 0.0023 P8 GC+1d culture TACACACCTG (4) 16 0.016 P8 GC+1d culture CTGGCTTTCA (6) 9.1 0.0091 P8 GC+1d culture AACCAGAAAA (4) 1.1 0.0011 P8 GC+SHH+1d culture CTGGCTTTCA (6) 19.9 0.0199 P8 GC+SHH+1d culture TACACACCTG (4) 10.5 0.0105 P8 GC+SHH+1d culture AACCAGAAAA (4) 2.3 0.0023 P8 GC+SHH+1d culture GCAGCCATCT (8) 1.2 0.0012 3T3 fibroblasts CTGGCTTTCA (6) 45.6 0.0456 3T3 fibroblasts TACACACCTG (4) 17.5 0.0175 E15 cortex CTGGCTTTCA (6) 19.8 0.0198 E15 cortex TACACACCTG (4) 4.9 0.0049 P1 cortex CTGGCTTTCA (6) 13.6 0.0136 P1 cortex TACACACCTG (4) 9.1 0.0091 P1 cortex GCTCACTTAC (3) 4.5 0.0045 Hypothalamus TACACACCTG (4) 9.1 0.0091 Hypothalamus ACAGAAAGTG (9) 3.6 0.0036 Hypothalamus GCAGCCATCT (8) 3.6 0.0036 Hypothalamus CCCAGCTTTT (11) 1.8 0.0018 Hypothalamus CTGGCTTTCA (6) 1.8 0.0018 E12.5 retina CTGGCTTTCA (6) 15 0.015 E14.5 retina CTGGCTTTCA (6) 21.9 0.0219 E14.5 retina GCAGCCATCT (8) 9.1 0.0091 E14.5 retina AACCAGAAAA (4) 1.8 0.0018 E16.5 retina CTGGCTTTCA (6) 19.9 0.0199 E16.5 retina CTGGCTCTCA (3) 3.6 0.0036 E16.5 retina GCAGCCATCT (8) 1.8 0.0018 E18.5 retina CTGGCTTTCA (6) 7.3 0.0073 E18.5 retina GCAGCCATCT (8) 3.6 0.0036 E18.5 retina CCCAGCTTTT (11) 1.8 0.0018 E18.5 retina GCAGCTGTTG (5) 1.8 0.0018 P0.5 retina CTGGCTTTCA (6) 13.7 0.0137 P0.5 retina TACACACCTG (4) 5.9 0.0059 P0.5 retina GCAGCCATCT (8) 2 0.002 P2.5 retina CTGGCTTTCA (6) 35.2 0.0352 P2.5 retina TACACACCTG (4) 3.5 0.0035 P2.5 retina AACCAGAAAA (4) 1.8 0.0018 P2.5 retina CTGGCTCTCA (3) 1.8 0.0018 P4.5 retina CTGGCTTTCA (6) 13.9 0.0139 P4.5 retina TACACACCTG (4) 4 0.004 P4.5 retina ACAGAAAGTG (9) 2 0.002 P6.5 retina CTGGCTTTCA (6) 21.7 0.0217 P6.5 retina TACACACCTG (4) 8.3 0.0083 P6.5 retina AACCAGAAAA (4) 1.7 0.0017 P10.5 crx- retina GCTCACTTAC (3) 3.7 0.0037 P10.5 crx- retina AACCAGAAAA (4) 1.9 0.0019 P10.5 crx- retina ACAGAAAGTG (9) 1.9 0.0019 P10.5 crx+ retina TACACACCTG (4) 9.6 0.0096 P10.5 crx+ retina GCAGCCATCT (8) 1.9 0.0019 Adult retinal TACACACCTG (4) 13 0.013 Adult retinal CTGGCTTTCA (6) 11.1 0.0111 Adult retinal CCCAGCTTTT (11) 1.9 0.0019 Adult retinal GCAGCCATCT (8) 1.9 0.0019 Adult retinal GCTCACTTAC (3) 1.9 0.0019 ONL TACACACCTG (4) 3.8 0.0038 ONL CTGGCTTTCA (6) 1.9 0.0019 ONL GCAGCTGTTG (5) 1.9 0.0019