Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.26412	Smc1l1	SMC (structural maintenance of chromosomes 1)-like 1 (S. cerevisiae)	X		24061
Gene Ontology	ATP binding | ATPase activity, coupled to transmembrane movement of substances | cell cycle | chromosome segregation | DNA repair | meiosis | membrane | mitosis | nucleus | transport
Human Homolog	SMC1L1[SMC1 structural maintenance of chromosomes 1-like 1 (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 30 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTAGATTGTT 13.1 0.0131 P8 Cb GC GATGCTATTA (2) 1.6 0.0016 P8 Cb GC GGTTTCCTGA (8) 1.6 0.0016 Cb medulloblastoma TTAGATTGTT 4.6 0.0046 Cb medulloblastoma GGTTTCCTGA (8) 2.3 0.0023 P8 GC+1d culture TTAGATTGTT 14.8 0.0148 P8 GC+1d culture GATGCTATTA (2) 1.1 0.0011 P8 GC+SHH+1d culture TTAGATTGTT 25.8 0.0258 3T3 fibroblasts TTAGATTGTT 7 0.007 E15 cortex GATGCTATTA (2) 4.9 0.0049 P1 cortex GATGCTATTA (2) 4.5 0.0045 P1 cortex GGTTTCCTGA (8) 4.5 0.0045 Hypothalamus TTAGATTGTT 7.2 0.0072 Hypothalamus GCTCAGGCTT (3) 1.8 0.0018 E12.5 retina TTAGATTGTT 18.8 0.0188 E14.5 retina TTAGATTGTT 12.8 0.0128 E14.5 retina GATGCTATTA (2) 1.8 0.0018 E16.5 retina TTAGATTGTT 16.3 0.0163 E18.5 retina TTAGATTGTT 14.6 0.0146 E18.5 retina GATGCTATTA (2) 1.8 0.0018 P0.5 retina TTAGATTGTT 7.9 0.0079 P2.5 retina TTAGATTGTT 5.3 0.0053 P4.5 retina TTAGATTGTT 21.8 0.0218 P4.5 retina GCTCAGGCTT (3) 2 0.002 P6.5 retina TTAGATTGTT 6.7 0.0067 P10.5 crx- retina TTAGATTGTT 3.7 0.0037 P10.5 crx+ retina GATGCTATTA (2) 3.8 0.0038 P10.5 crx+ retina TTAGATTGTT 3.8 0.0038 Adult retinal TTAGATTGTT 3.7 0.0037 ONL TTAGATTGTT 9.6 0.0096