Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.265125	9430077D24Rik	RIKEN cDNA 9430077D24 gene	9		77305
Human Homolog	PRO2730[hypothetical protein PRO2730]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 152 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC GCAAAAAAAA (50) 14.7 0.0147 P8 Cb GC TTATCAGTCG (2) 14.7 0.0147 P8 Cb GC TTAAAAAAAA (80) 13.1 0.0131 P8 Cb GC TCACCTGTGG 8.2 0.0082 P8 Cb GC GGAAAAAAAG (8) 1.6 0.0016 P8 Cb GC GTAAAAAAAG (6) 1.6 0.0016 P8 Cb GC TTTCTTCAGG (3) 1.6 0.0016 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma GCAAAAAAAA (50) 60.1 0.0601 Cb medulloblastoma TTAAAAAAAA (80) 53.2 0.0532 Cb medulloblastoma TCACCTGTGG 13.9 0.0139 Cb medulloblastoma TTTAAAAAAA (34) 6.9 0.0069 Cb medulloblastoma TTATCAGTCG (2) 4.6 0.0046 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture TTAAAAAAAA (80) 28.5 0.0285 P8 GC+1d culture GCAAAAAAAA (50) 12.6 0.0126 P8 GC+1d culture TCACCTGTGG 10.3 0.0103 P8 GC+1d culture TTATCAGTCG (2) 9.1 0.0091 P8 GC+1d culture GCAAAAAAAG (4) 1.1 0.0011 P8 GC+1d culture GCTTCTGTGC 1.1 0.0011 P8 GC+1d culture GGCCAGCTCT (2) 1.1 0.0011 P8 GC+1d culture TTTCTTCAGG (3) 1.1 0.0011 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture TTAAAAAAAA (80) 34 0.034 P8 GC+SHH+1d culture GCAAAAAAAA (50) 29.3 0.0293 P8 GC+SHH+1d culture TCACCTGTGG 12.9 0.0129 P8 GC+SHH+1d culture TTATCAGTCG (2) 9.4 0.0094 P8 GC+SHH+1d culture TTTAAAAAAA (34) 5.9 0.0059 P8 GC+SHH+1d culture TTTCTTAGGT (3) 2.3 0.0023 P8 GC+SHH+1d culture CACATTACAT 1.2 0.0012 P8 GC+SHH+1d culture TTTGAAAGAA (2) 1.2 0.0012 3T3 fibroblasts GGCCAGCTCT (2) 35 0.035 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts TCACCTGTGG 7 0.007 3T3 fibroblasts GCAAAAAAAA (50) 3.5 0.0035 E15 cortex TCACCTGTGG 14.8 0.0148 E15 cortex GCAAAAAAAA (50) 9.9 0.0099 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex TTAAAAAAAA (80) 4.9 0.0049 E15 cortex TTATCAGTCG (2) 4.9 0.0049 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex TCACCTGTGG 13.6 0.0136 P1 cortex TTAAAAAAAA (80) 13.6 0.0136 P1 cortex GCAAAAAAAA (50) 4.5 0.0045 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus GCAAAAAAAA (50) 19.9 0.0199 Hypothalamus TTAAAAAAAA (80) 19.9 0.0199 Hypothalamus TCACCTGTGG 14.5 0.0145 Hypothalamus TTTAAAAAAA (34) 10.9 0.0109 Hypothalamus GCAAAAAAAG (4) 5.4 0.0054 Hypothalamus TTATCAGTCG (2) 3.6 0.0036 Hypothalamus TTTCTTCAGG (3) 3.6 0.0036 Hypothalamus CACATTACAT 1.8 0.0018 Hypothalamus GAACATCTAA (3) 1.8 0.0018 Hypothalamus GTAAAAAAAG (6) 1.8 0.0018 Hypothalamus TCTGCACAAA (4) 1.8 0.0018 Hypothalamus TTTCTTAGGT (3) 1.8 0.0018 Hypothalamus TTTGAAAGAA (2) 1.8 0.0018 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina TTAAAAAAAA (80) 11.3 0.0113 E12.5 retina GCAAAAAAAA (50) 9.4 0.0094 E12.5 retina TCACCTGTGG 7.5 0.0075 E12.5 retina TTATCAGTCG (2) 7.5 0.0075 E12.5 retina GTAAAAAAAG (6) 3.8 0.0038 E12.5 retina TTTAAAAAAA (34) 1.9 0.0019 E12.5 retina TTTCTTAGGT (3) 1.9 0.0019 E12.5 retina TTTGAAAGAA (2) 1.9 0.0019 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina TTAAAAAAAA (80) 16.4 0.0164 E14.5 retina GCAAAAAAAA (50) 12.8 0.0128 E14.5 retina TTTAAAAAAA (34) 9.1 0.0091 E14.5 retina TCACCTGTGG 7.3 0.0073 E14.5 retina TTATCAGTCG (2) 7.3 0.0073 E14.5 retina GCAAAAAAAG (4) 1.8 0.0018 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina TTAAAAAAAA (80) 16.3 0.0163 E16.5 retina GCAAAAAAAA (50) 10.9 0.0109 E16.5 retina TCACCTGTGG 10.9 0.0109 E16.5 retina TCTGCACAAA (4) 5.4 0.0054 E16.5 retina TTATCAGTCG (2) 3.6 0.0036 E16.5 retina GCTTCTGTGC 1.8 0.0018 E16.5 retina TTTAAAAAAA (34) 1.8 0.0018 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina TTAAAAAAAA (80) 50.9 0.0509 E18.5 retina GCAAAAAAAA (50) 25.5 0.0255 E18.5 retina TCACCTGTGG 10.9 0.0109 E18.5 retina TTTAAAAAAA (34) 10.9 0.0109 E18.5 retina TTATCAGTCG (2) 5.5 0.0055 E18.5 retina CACATTACAT 3.6 0.0036 E18.5 retina GCAAAAAAAG (4) 1.8 0.0018 E18.5 retina TTTCTTCAGG (3) 1.8 0.0018 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina GCAAAAAAAA (50) 17.7 0.0177 P0.5 retina TTAAAAAAAA (80) 17.7 0.0177 P0.5 retina TCACCTGTGG 7.9 0.0079 P0.5 retina GCTTCTGTGC 2 0.002 P0.5 retina TCTGCACAAA (4) 2 0.002 P0.5 retina TTATCAGTCG (2) 2 0.002 P0.5 retina TTTAAAAAAA (34) 2 0.002 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina TTAAAAAAAA (80) 40.5 0.0405 P2.5 retina GCAAAAAAAA (50) 22.9 0.0229 P2.5 retina TCACCTGTGG 8.8 0.0088 P2.5 retina TTATCAGTCG (2) 7 0.007 P2.5 retina GGAAAAAAAG (8) 5.3 0.0053 P2.5 retina GAACATCTAA (3) 1.8 0.0018 P2.5 retina TTTAAAAAAA (34) 1.8 0.0018 P2.5 retina TTTCTTAGGT (3) 1.8 0.0018 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina TTAAAAAAAA (80) 47.6 0.0476 P4.5 retina GCAAAAAAAA (50) 25.8 0.0258 P4.5 retina TCACCTGTGG 23.8 0.0238 P4.5 retina TTATCAGTCG (2) 5.9 0.0059 P4.5 retina TTTAAAAAAA (34) 5.9 0.0059 P4.5 retina TTTCTTAGGT (3) 2 0.002 P4.5 retina TTTCTTCAGG (3) 2 0.002 P4.5 retina TTTGAAAGAA (2) 2 0.002 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina TCACCTGTGG 21.7 0.0217 P6.5 retina TTAAAAAAAA (80) 16.7 0.0167 P6.5 retina GCAAAAAAAA (50) 11.7 0.0117 P6.5 retina TTTAAAAAAA (34) 6.7 0.0067 P6.5 retina TTATCAGTCG (2) 5 0.005 P10.5 crx- retina TCACCTGTGG 39 0.039 P10.5 crx- retina TTAAAAAAAA (80) 13 0.013 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina GCAAAAAAAA (50) 5.6 0.0056 P10.5 crx- retina TTATCAGTCG (2) 3.7 0.0037 P10.5 crx- retina TCTGCACAAA (4) 1.9 0.0019 P10.5 crx+ retina TCACCTGTGG 32.7 0.0327 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina TTAAAAAAAA (80) 5.8 0.0058 P10.5 crx+ retina TTATCAGTCG (2) 5.8 0.0058 P10.5 crx+ retina GCAAAAAAAG (4) 3.8 0.0038 P10.5 crx+ retina GAACATCTAA (3) 1.9 0.0019 P10.5 crx+ retina GCAAAAAAAA (50) 1.9 0.0019 P10.5 crx+ retina TTTCTTAGGT (3) 1.9 0.0019 P10.5 crx+ retina TTTCTTCAGG (3) 1.9 0.0019 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal TCACCTGTGG 16.7 0.0167 Adult retinal GCAAAAAAAA (50) 11.1 0.0111 Adult retinal TTAAAAAAAA (80) 7.4 0.0074 Adult retinal TCTGCACAAA (4) 1.9 0.0019 Adult retinal TTATCAGTCG (2) 1.9 0.0019 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL TTAAAAAAAA (80) 7.7 0.0077 ONL TTTAAAAAAA (34) 7.7 0.0077 ONL GTTCTGTGCC 5.7 0.0057 ONL TCACCTGTGG 3.8 0.0038 ONL GCAAAAAAAA (50) 1.9 0.0019 ONL TTATCAGTCG (2) 1.9 0.0019