Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.265209
4930444A19Rik
RIKEN cDNA 4930444A19 gene
1
73980
Mm.265209
A130048G24Rik
RIKEN cDNA A130048G24 gene
1
320170
Mm.265209
E130014H08Rik
RIKEN cDNA E130014H08 gene
1
329154
Gene Ontology
DNA binding
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATTCTGCACT (
6
)
6.5
0.0065
P8 Cb GC
CATTCAGATG
(
3
)
4.9
0.0049
P8 Cb GC
TCTGTCTGCC (
4
)
4.9
0.0049
P8 Cb GC
TTTGACAGTA (
5
)
3.3
0.0033
Cb medulloblastoma
ATTCTGCACT (
6
)
2.3
0.0023
Cb medulloblastoma
TCTGTCTGCC (
4
)
2.3
0.0023
P8 GC+1d culture
TCTGTCTGCC (
4
)
9.1
0.0091
P8 GC+1d culture
ATTCTGCACT (
6
)
5.7
0.0057
P8 GC+1d culture
TTTGACAGTA (
5
)
2.3
0.0023
P8 GC+1d culture
CATTCAGATG
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
ATTCTGCACT (
6
)
14.1
0.0141
P8 GC+SHH+1d culture
TCTGTCTGCC (
4
)
11.7
0.0117
P8 GC+SHH+1d culture
CATTCAGATG
(
3
)
8.2
0.0082
P8 GC+SHH+1d culture
TTTGACAGTA (
5
)
3.5
0.0035
E15 cortex
TCTGTCTGCC (
4
)
9.9
0.0099
E15 cortex
ATTCTGCACT (
6
)
4.9
0.0049
E15 cortex
CATTCAGATG
(
3
)
4.9
0.0049
Hypothalamus
ATTCTGCACT (
6
)
3.6
0.0036
Hypothalamus
TCTGTCTGCC (
4
)
3.6
0.0036
E12.5 retina
CATTCAGATG
(
3
)
5.6
0.0056
E12.5 retina
TCTGTCTGCC (
4
)
5.6
0.0056
E12.5 retina
ATTCTGCACT (
6
)
1.9
0.0019
E14.5 retina
GCTGAATGAA
(
4
)
1.8
0.0018
E16.5 retina
ATTCTGCACT (
6
)
1.8
0.0018
E18.5 retina
TCTGTCTGCC (
4
)
3.6
0.0036
P0.5 retina
TCTGTCTGCC (
4
)
5.9
0.0059
P0.5 retina
ATTCTGCACT (
6
)
2
0.002
P0.5 retina
CATTCAGATG
(
3
)
2
0.002
P2.5 retina
TCTGTCTGCC (
4
)
7
0.007
P4.5 retina
GCTGAATGAA
(
4
)
4
0.004
P4.5 retina
ATTCTGCACT (
6
)
2
0.002
P4.5 retina
CATTCAGATG
(
3
)
2
0.002
P6.5 retina
TCTGTCTGCC (
4
)
5
0.005
P6.5 retina
ATTCTGCACT (
6
)
1.7
0.0017
P10.5 crx- retina
ATTCTGCACT (
6
)
3.7
0.0037
P10.5 crx- retina
CATTCAGATG
(
3
)
3.7
0.0037
P10.5 crx- retina
TCTGTCTGCC (
4
)
3.7
0.0037
P10.5 crx+ retina
ATTCTGCACT (
6
)
3.8
0.0038
P10.5 crx+ retina
CATTCAGATG
(
3
)
3.8
0.0038
P10.5 crx+ retina
TCTGTCTGCC (
4
)
3.8
0.0038
P10.5 crx+ retina
GTTTGACAGT
(
3
)
1.9
0.0019
Adult retinal
TCTGTCTGCC (
4
)
3.7
0.0037
Adult retinal
ATTCTGCACT (
6
)
1.9
0.0019
Adult retinal
GTTTGACAGT
(
3
)
1.9
0.0019
ONL
GTTTGACAGT
(
3
)
5.7
0.0057
ONL
ATTCTGCACT (
6
)
1.9
0.0019
ONL
TCTGTCTGCC (
4
)
1.9
0.0019
