Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.26544	Hoxd9	homeo box D9	2	2 45.0 cM	15438
Gene Ontology	organogenesis | pattern specification | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
Human Homolog	HOXD9[homeo box D9]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 19 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGGAGATTA (4) 4.9 0.0049 P8 GC+1d culture AGGGAGATTA (4) 2.3 0.0023 P8 GC+1d culture TTTCTGAAAA 1.1 0.0011 P8 GC+SHH+1d culture AGGGAGATTA (4) 1.2 0.0012 3T3 fibroblasts AGGGAGATTA (4) 7 0.007 Hypothalamus AGGGAGATTA (4) 1.8 0.0018 Hypothalamus TTTCTGAAAA 1.8 0.0018 E12.5 retina AGGGAGATTA (4) 3.8 0.0038 E16.5 retina AGGGAGATTA (4) 5.4 0.0054 E18.5 retina AGGGAGATTA (4) 3.6 0.0036 P2.5 retina TTTCTGAAAA 3.5 0.0035 P2.5 retina AGGGAGATTA (4) 1.8 0.0018 P6.5 retina AGGGAGATTA (4) 3.3 0.0033 P10.5 crx- retina AGGGAGATTA (4) 11.1 0.0111 P10.5 crx+ retina AGGGAGATTA (4) 11.5 0.0115 P10.5 crx+ retina TTTCTGAAAA 1.9 0.0019 Adult retinal AGGGAGATTA (4) 3.7 0.0037 Adult retinal TTTCTGAAAA 1.9 0.0019 ONL AGGGAGATTA (4) 5.7 0.0057