Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.26652
Syne2
synaptic nuclear envelope 2
12
12 33.0 cM
326621
Gene Ontology
biological_process unknown
|
molecular_function unknown
|
nuclear membrane
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 44 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGAGAAAGA (
17
)
4.9
0.0049
Cb medulloblastoma
AAGAGAAAGA (
17
)
4.6
0.0046
P8 GC+1d culture
AAGAGAAAGA (
17
)
9.1
0.0091
P8 GC+1d culture
TTTAAAGAGA
(
3
)
3.4
0.0034
P8 GC+SHH+1d culture
AAGAGAAAGA (
17
)
7
0.007
P8 GC+SHH+1d culture
TCACCAGCCC (
8
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTAAAGAGA
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTTAAAGAA
(
5
)
1.2
0.0012
P1 cortex
AAGAGAAAGA (
17
)
4.5
0.0045
P1 cortex
TTTAAAGAGA
(
3
)
4.5
0.0045
Hypothalamus
AAGAGAAAGA (
17
)
14.5
0.0145
E12.5 retina
AAGAGAAAGA (
17
)
7.5
0.0075
E12.5 retina
AGAAAATAAA (
5
)
3.8
0.0038
E14.5 retina
AAGAGAAAGA (
17
)
14.6
0.0146
E16.5 retina
AAGAGAAAGA (
17
)
1.8
0.0018
E16.5 retina
AGAAAATAAA (
5
)
1.8
0.0018
E18.5 retina
AAGAGAAAGA (
17
)
16.4
0.0164
E18.5 retina
AGAAAATAAA (
5
)
1.8
0.0018
E18.5 retina
TCACCAGCCC (
8
)
1.8
0.0018
E18.5 retina
TTTTAAAGAA
(
5
)
1.8
0.0018
P2.5 retina
AAGAGAAAGA (
17
)
8.8
0.0088
P2.5 retina
TTTAAAGAGA
(
3
)
1.8
0.0018
P2.5 retina
TTTTAAAGAA
(
5
)
1.8
0.0018
P4.5 retina
AAGAGAAAGA (
17
)
5.9
0.0059
P4.5 retina
AGAAAATAAA (
5
)
2
0.002
P6.5 retina
TTTAAAGAGA
(
3
)
8.3
0.0083
P6.5 retina
AAGAGAAAGA (
17
)
5
0.005
P6.5 retina
AGAAAATAAA (
5
)
1.7
0.0017
P6.5 retina
GCCGACAGCC
(
2
)
1.7
0.0017
P10.5 crx- retina
AAGAGAAAGA (
17
)
9.3
0.0093
P10.5 crx- retina
AGAAAATAAA (
5
)
1.9
0.0019
P10.5 crx- retina
TTTAAAGAGA
(
3
)
1.9
0.0019
P10.5 crx+ retina
AAGAGAAAGA (
17
)
13.5
0.0135
P10.5 crx+ retina
TCACCAGCCC (
8
)
1.9
0.0019
Adult retinal
AAGAGAAAGA (
17
)
5.6
0.0056
Adult retinal
AGAAAATAAA (
5
)
1.9
0.0019
Adult retinal
GCCGACAGCC
(
2
)
1.9
0.0019
Adult retinal
TTTAAAGAGA
(
3
)
1.9
0.0019
Adult retinal
TTTTAAAGAA
(
5
)
1.9
0.0019
ONL
AAGAGAAAGA (
17
)
13.4
0.0134
ONL
TTTAAAGAGA
(
3
)
5.7
0.0057
ONL
GCCGACAGCC
(
2
)
3.8
0.0038
ONL
AGAAAATAAA (
5
)
1.9
0.0019
ONL
TTTTAAAGAA
(
5
)
1.9
0.0019
