Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.266668	BC005537	cDNA sequence BC005537	13		79555
Human Homolog	C6orf62[chromosome 6 open reading frame 62]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 124 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCTGTTGAA (2) 29.4 0.0294 P8 Cb GC ACTCCTTTGG (2) 4.9 0.0049 P8 Cb GC TGGCTAAACT (3) 4.9 0.0049 P8 Cb GC CACAGAACAC (3) 3.3 0.0033 P8 Cb GC ATTCCGAATT (107) 1.6 0.0016 P8 Cb GC CACAGAAAAA (5) 1.6 0.0016 P8 Cb GC GATCTGGCTG (3) 1.6 0.0016 P8 Cb GC TTGTCTGTGT (2) 1.6 0.0016 P8 Cb GC TTTGTGCTGG (3) 1.6 0.0016 P8 Cb GC TTTGTTTTCT (4) 1.6 0.0016 Cb medulloblastoma GGCTGTTGAA (2) 92.5 0.0925 Cb medulloblastoma TAACCCCCAA (3) 4.6 0.0046 Cb medulloblastoma CACAGAAAAA (5) 2.3 0.0023 Cb medulloblastoma GGACAAGGAA (2) 2.3 0.0023 Cb medulloblastoma GTGATTTTCC (3) 2.3 0.0023 Cb medulloblastoma GTTTTGGTGT (2) 2.3 0.0023 Cb medulloblastoma TGGCTAAACT (3) 2.3 0.0023 Cb medulloblastoma TTTGTTTTCT (4) 2.3 0.0023 P8 GC+1d culture GGCTGTTGAA (2) 18.3 0.0183 P8 GC+1d culture TTTGTTTTCT (4) 13.7 0.0137 P8 GC+1d culture GATCTGGCTG (3) 3.4 0.0034 P8 GC+1d culture TGGCTAAACT (3) 3.4 0.0034 P8 GC+1d culture CACAGAACAC (3) 2.3 0.0023 P8 GC+1d culture TTTGTGCTGG (3) 2.3 0.0023 P8 GC+1d culture AGTCCATTTT (5) 1.1 0.0011 P8 GC+1d culture TAAGGACGGA (4) 1.1 0.0011 P8 GC+1d culture TTGTCTGTGT (2) 1.1 0.0011 P8 GC+SHH+1d culture GGCTGTTGAA (2) 21.1 0.0211 P8 GC+SHH+1d culture TTTGTTTTCT (4) 7 0.007 P8 GC+SHH+1d culture GATCTGGCTG (3) 5.9 0.0059 P8 GC+SHH+1d culture TGGCTAAACT (3) 5.9 0.0059 P8 GC+SHH+1d culture AGTCCATTTT (5) 4.7 0.0047 P8 GC+SHH+1d culture TTGTCTGTGT (2) 1.2 0.0012 3T3 fibroblasts GGCTGTTGAA (2) 7 0.007 E15 cortex TTTGTGCTGG (3) 4.9 0.0049 E15 cortex TTTGTTTTCT (4) 4.9 0.0049 P1 cortex GTGATTTTCC (3) 22.7 0.0227 P1 cortex GATCTGGCTG (3) 4.5 0.0045 P1 cortex TAACCCCCAA (3) 4.5 0.0045 P1 cortex TGGCTAAACT (3) 4.5 0.0045 P1 cortex TTTGTTTTCT (4) 4.5 0.0045 Hypothalamus GGCTGTTGAA (2) 81.5 0.0815 Hypothalamus GATCTGGCTG (3) 3.6 0.0036 Hypothalamus GCCCAGTGCA 1.8 0.0018 Hypothalamus TGGCTAAACT (3) 1.8 0.0018 Hypothalamus TTTGTTTTCT (4) 1.8 0.0018 E12.5 retina GGCTGTTGAA (2) 18.8 0.0188 E12.5 retina GATCTGGCTG (3) 1.9 0.0019 E12.5 retina GGACAAGGAA (2) 1.9 0.0019 E12.5 retina TGGCTAAACT (3) 1.9 0.0019 E14.5 retina CACAGAACAC (3) 3.6 0.0036 E14.5 retina AGTCCATTTT (5) 1.8 0.0018 E14.5 retina TAAGGACGGA (4) 1.8 0.0018 E14.5 retina TTGTCTGTGT (2) 1.8 0.0018 E16.5 retina GGCTGTTGAA (2) 14.5 0.0145 E16.5 retina GCCCAGTGCA 3.6 0.0036 E16.5 retina TTTGTTTTCT (4) 3.6 0.0036 E16.5 retina AGTCCATTTT (5) 1.8 0.0018 E16.5 retina TTTGTGCTGG (3) 1.8 0.0018 E18.5 retina GGCTGTTGAA (2) 29.1 0.0291 E18.5 retina TAACCCCCAA (3) 5.5 0.0055 E18.5 retina CACAGAACAC (3) 1.8 0.0018 E18.5 retina TTTGTTTTCT (4) 1.8 0.0018 P0.5 retina GGCTGTTGAA (2) 13.7 0.0137 P0.5 retina TAACCCCCAA (3) 3.9 0.0039 P0.5 retina TGGCTAAACT (3) 3.9 0.0039 P0.5 retina AGTCCATTTT (5) 2 0.002 P0.5 retina CACAGAACAC (3) 2 0.002 P0.5 retina GTTTTGGTGT (2) 2 0.002 P0.5 retina TTTGTTTTCT (4) 2 0.002 P2.5 retina GGCTGTTGAA (2) 24.6 0.0246 P2.5 retina TAACCCCCAA (3) 3.5 0.0035 P2.5 retina TTTGTTTTCT (4) 3.5 0.0035 P2.5 retina CACAGAAAAA (5) 1.8 0.0018 P2.5 retina GATCTGGCTG (3) 1.8 0.0018 P2.5 retina GCCCAGTGCA 1.8 0.0018 P2.5 retina GGACAAGGAA (2) 1.8 0.0018 P2.5 retina GTGATTTTCC (3) 1.8 0.0018 P2.5 retina TGGCTAAACT (3) 1.8 0.0018 P2.5 retina TTTGTGCTGG (3) 1.8 0.0018 P4.5 retina GGCTGTTGAA (2) 13.9 0.0139 P4.5 retina ATTCCGAATT (107) 2 0.002 P4.5 retina CACAGAACAC (3) 2 0.002 P4.5 retina GTTTTGGTGT (2) 2 0.002 P4.5 retina TAACCCCCAA (3) 2 0.002 P4.5 retina TAAGGACGGA (4) 2 0.002 P4.5 retina TGGCTAAACT (3) 2 0.002 P6.5 retina GGCTGTTGAA (2) 8.3 0.0083 P6.5 retina GATCTGGCTG (3) 6.7 0.0067 P6.5 retina TAACCCCCAA (3) 6.7 0.0067 P6.5 retina TTTGTTTTCT (4) 5 0.005 P6.5 retina ATTCCGAATT (107) 3.3 0.0033 P6.5 retina TGGCTAAACT (3) 3.3 0.0033 P6.5 retina TTGTCTGTGT (2) 3.3 0.0033 P6.5 retina CACAGAACAC (3) 1.7 0.0017 P6.5 retina GTGATTTTCC (3) 1.7 0.0017 P10.5 crx- retina TTGTCTGTGT (2) 5.6 0.0056 P10.5 crx- retina GGCTGTTGAA (2) 3.7 0.0037 P10.5 crx- retina TAACCCCCAA (3) 3.7 0.0037 P10.5 crx- retina TTTGTTTTCT (4) 3.7 0.0037 P10.5 crx- retina AGTCCATTTT (5) 1.9 0.0019 P10.5 crx- retina GCCCAGTGCA 1.9 0.0019 P10.5 crx- retina TAAGGACGGA (4) 1.9 0.0019 P10.5 crx- retina TGGCTAAACT (3) 1.9 0.0019 P10.5 crx+ retina TAACCCCCAA (3) 9.6 0.0096 P10.5 crx+ retina GGCTGTTGAA (2) 5.8 0.0058 P10.5 crx+ retina AGTCCATTTT (5) 3.8 0.0038 P10.5 crx+ retina TGGCTAAACT (3) 3.8 0.0038 P10.5 crx+ retina TTTGTTTTCT (4) 3.8 0.0038 P10.5 crx+ retina GATCTGGCTG (3) 1.9 0.0019 Adult retinal TGGCTAAACT (3) 5.6 0.0056 Adult retinal TTTGTTTTCT (4) 5.6 0.0056 Adult retinal ACTCCTTTGG (2) 3.7 0.0037 Adult retinal TTGTCTGTGT (2) 3.7 0.0037 Adult retinal CACAGAACAC (3) 1.9 0.0019 Adult retinal GATCTGGCTG (3) 1.9 0.0019 Adult retinal GTGATTTTCC (3) 1.9 0.0019 Adult retinal TAACCCCCAA (3) 1.9 0.0019 ONL GGCTGTTGAA (2) 9.6 0.0096 ONL GATCTGGCTG (3) 5.7 0.0057 ONL ATTCCGAATT (107) 3.8 0.0038 ONL GTGATTTTCC (3) 3.8 0.0038 ONL TGGCTAAACT (3) 3.8 0.0038 ONL TAACCCCCAA (3) 1.9 0.0019