Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.267061	C430015D01Rik	RIKEN cDNA C430015D01 gene	9		78705
Mm.267061	E030022I16Rik	RIKEN cDNA E030022I16 gene	9		320766
Mm.267061	Ddx6	DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	9	9 26.0 cM	13209
Gene Ontology	ATP binding | ATP dependent helicase activity | helicase activity | hydrolase activity | intracellular | nucleic acid binding | nucleus | RNA binding | RNA helicase activity
Human Homolog	DDX6[DEAD (Asp-Glu-Ala-Asp) box polypeptide 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 29 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TATGTACAGT (5) 1.6 0.0016 Cb medulloblastoma TATTTAAAAA (8) 4.6 0.0046 Cb medulloblastoma CTGCAGAAAG (4) 2.3 0.0023 Cb medulloblastoma TATGTACAGT (5) 2.3 0.0023 P8 GC+1d culture ATCCTCCTGC (7) 1.1 0.0011 P8 GC+1d culture CTGCAGAAAG (4) 1.1 0.0011 P8 GC+SHH+1d culture TATGTACAGT (5) 1.2 0.0012 P8 GC+SHH+1d culture TATTTAAAAA (8) 1.2 0.0012 P8 GC+SHH+1d culture TGTGTCTGAA (5) 1.2 0.0012 3T3 fibroblasts CTGCAGAAAG (4) 3.5 0.0035 E15 cortex CTGCAGAAAG (4) 9.9 0.0099 E12.5 retina CTGCAGAAAG (4) 1.9 0.0019 E12.5 retina TATGTACAGT (5) 1.9 0.0019 E14.5 retina CTGCAGAAAG (4) 1.8 0.0018 E14.5 retina GGTCTGTCCA (9) 1.8 0.0018 E18.5 retina TATTTAAAAA (8) 3.6 0.0036 P0.5 retina CTGCAGAAAG (4) 2 0.002 P2.5 retina TATTTAAAAA (8) 5.3 0.0053 P2.5 retina TGTGTCTGAA (5) 1.8 0.0018 P6.5 retina TATGTACAGT (5) 1.7 0.0017 P6.5 retina TATTTAAAAA (8) 1.7 0.0017 P10.5 crx- retina ATCCTCCTGC (7) 3.7 0.0037 P10.5 crx- retina TATTTAAAAA (8) 1.9 0.0019 P10.5 crx+ retina TATGTACAGT (5) 1.9 0.0019 Adult retinal ATCCTCCTGC (7) 1.9 0.0019 Adult retinal TATTTAAAAA (8) 1.9 0.0019 ONL ATCCTCCTGC (7) 3.8 0.0038 ONL GGTCTGTCCA (9) 3.8 0.0038 ONL TGTGTCTGAA (5) 1.9 0.0019