Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.267473	E130113K22Rik	RIKEN cDNA E130113K22 gene	15		239510
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 106 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGCGCACG (61) 13.1 0.0131 P8 Cb GC TTAAAACTGA (3) 11.4 0.0114 P8 Cb GC GAACATTTCA (5) 4.9 0.0049 P8 Cb GC GTGGTGAATG (5) 3.3 0.0033 P8 Cb GC ACACGAACAG (2) 1.6 0.0016 P8 Cb GC ATGGGAAAAT (5) 1.6 0.0016 P8 Cb GC TATAACTTTT (2) 1.6 0.0016 P8 Cb GC TGTGTAGTGT (4) 1.6 0.0016 Cb medulloblastoma TGTGTAGTGT (4) 9.2 0.0092 Cb medulloblastoma GTGGCGCACG (61) 6.9 0.0069 Cb medulloblastoma GAACATTTCA (5) 4.6 0.0046 Cb medulloblastoma AGCAGAAATT (6) 2.3 0.0023 Cb medulloblastoma ATGGGAAAAT (5) 2.3 0.0023 Cb medulloblastoma TAGCACTGTG 2.3 0.0023 Cb medulloblastoma TATAACTTTT (2) 2.3 0.0023 Cb medulloblastoma TTAAAACTGA (3) 2.3 0.0023 P8 GC+1d culture GTGGCGCACG (61) 6.8 0.0068 P8 GC+1d culture TTAAAACTGA (3) 6.8 0.0068 P8 GC+1d culture TATAACTTTT (2) 4.6 0.0046 P8 GC+1d culture TGTGTAGTGT (4) 4.6 0.0046 P8 GC+1d culture TAGCACTGTG 3.4 0.0034 P8 GC+1d culture GAACATTTCA (5) 2.3 0.0023 P8 GC+SHH+1d culture TATAACTTTT (2) 5.9 0.0059 P8 GC+SHH+1d culture TTAAAACTGA (3) 4.7 0.0047 P8 GC+SHH+1d culture GAACATTTCA (5) 3.5 0.0035 P8 GC+SHH+1d culture AGCAGAAATT (6) 2.3 0.0023 P8 GC+SHH+1d culture GTGGCGCACG (61) 2.3 0.0023 P8 GC+SHH+1d culture TGTGTAGTGT (4) 2.3 0.0023 P8 GC+SHH+1d culture ACACGAACAG (2) 1.2 0.0012 P8 GC+SHH+1d culture ATGGGAAAAT (5) 1.2 0.0012 P8 GC+SHH+1d culture CCCAGCTTAA (7) 1.2 0.0012 3T3 fibroblasts GTGGCGCACG (61) 63.1 0.0631 3T3 fibroblasts CCCAGCTTAA (7) 3.5 0.0035 E15 cortex GTGGCGCACG (61) 113.8 0.1138 E15 cortex ATGGGAAAAT (5) 9.9 0.0099 P1 cortex GTGGCGCACG (61) 18.2 0.0182 P1 cortex ACACGAACAG (2) 4.5 0.0045 P1 cortex ATGGGAAAAT (5) 4.5 0.0045 Hypothalamus GTGGCGCACG (61) 3.6 0.0036 Hypothalamus TTAAAACTGA (3) 3.6 0.0036 Hypothalamus GTGGTGAATG (5) 1.8 0.0018 E12.5 retina GAACATTTCA (5) 11.3 0.0113 E12.5 retina GTGGCGCACG (61) 11.3 0.0113 E12.5 retina CCTGATGACT 3.8 0.0038 E12.5 retina TTAAAACTGA (3) 3.8 0.0038 E14.5 retina GTGGCGCACG (61) 29.2 0.0292 E14.5 retina GAACATTTCA (5) 3.6 0.0036 E14.5 retina TGTGTAGTGT (4) 3.6 0.0036 E14.5 retina TTAAAACTGA (3) 3.6 0.0036 E16.5 retina GTGGCGCACG (61) 25.4 0.0254 E16.5 retina GAACATTTCA (5) 5.4 0.0054 E16.5 retina TTAAAACTGA (3) 5.4 0.0054 E16.5 retina GTGGTGAATG (5) 1.8 0.0018 E16.5 retina TAGCACTGTG 1.8 0.0018 E16.5 retina TGTGTAGTGT (4) 1.8 0.0018 E18.5 retina GTGGCGCACG (61) 10.9 0.0109 E18.5 retina GAACATTTCA (5) 9.1 0.0091 E18.5 retina TATAACTTTT (2) 9.1 0.0091 E18.5 retina TGTGTAGTGT (4) 3.6 0.0036 E18.5 retina TTAAAACTGA (3) 3.6 0.0036 E18.5 retina GTGGTGAATG (5) 1.8 0.0018 E18.5 retina TAGCACTGTG 1.8 0.0018 P0.5 retina GTGGCGCACG (61) 25.5 0.0255 P0.5 retina GAACATTTCA (5) 3.9 0.0039 P0.5 retina TAGCACTGTG 3.9 0.0039 P0.5 retina TGTGTAGTGT (4) 3.9 0.0039 P0.5 retina GTGGTGAATG (5) 2 0.002 P0.5 retina TATAACTTTT (2) 2 0.002 P2.5 retina GTGGCGCACG (61) 17.6 0.0176 P2.5 retina TTAAAACTGA (3) 14.1 0.0141 P2.5 retina GAACATTTCA (5) 7 0.007 P2.5 retina TGTGTAGTGT (4) 5.3 0.0053 P2.5 retina AGCAGAAATT (6) 1.8 0.0018 P2.5 retina TAGCACTGTG 1.8 0.0018 P2.5 retina TATAACTTTT (2) 1.8 0.0018 P4.5 retina GTGGCGCACG (61) 17.8 0.0178 P4.5 retina TATAACTTTT (2) 5.9 0.0059 P4.5 retina ATGGGAAAAT (5) 4 0.004 P4.5 retina CCTGATGACT 4 0.004 P4.5 retina TGTGTAGTGT (4) 4 0.004 P4.5 retina TTAAAACTGA (3) 4 0.004 P6.5 retina GTGGCGCACG (61) 38.3 0.0383 P6.5 retina TGTGTAGTGT (4) 10 0.01 P6.5 retina TTAAAACTGA (3) 10 0.01 P6.5 retina GAACATTTCA (5) 8.3 0.0083 P6.5 retina CCTGATGACT 3.3 0.0033 P6.5 retina TATAACTTTT (2) 3.3 0.0033 P6.5 retina CCCAGCTTAA (7) 1.7 0.0017 P10.5 crx- retina GTGGCGCACG (61) 13 0.013 P10.5 crx- retina TGTGTAGTGT (4) 11.1 0.0111 P10.5 crx- retina TTAAAACTGA (3) 11.1 0.0111 P10.5 crx- retina GAACATTTCA (5) 1.9 0.0019 P10.5 crx+ retina GTGGCGCACG (61) 32.7 0.0327 P10.5 crx+ retina GAACATTTCA (5) 9.6 0.0096 P10.5 crx+ retina TTAAAACTGA (3) 7.7 0.0077 P10.5 crx+ retina ATGGGAAAAT (5) 1.9 0.0019 P10.5 crx+ retina TGTGTAGTGT (4) 1.9 0.0019 Adult retinal GTGGCGCACG (61) 22.2 0.0222 Adult retinal TGTGTAGTGT (4) 1.9 0.0019 Adult retinal TTAAAACTGA (3) 1.9 0.0019 ONL GTGGCGCACG (61) 23 0.023 ONL CAGCCACCTG (2) 7.7 0.0077 ONL GAACATTTCA (5) 3.8 0.0038 ONL TGTGTAGTGT (4) 3.8 0.0038 ONL CCCAGCTTAA (7) 1.9 0.0019 ONL TTAAAACTGA (3) 1.9 0.0019