Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.268004
Coil
coilin
11
11 50.0 cM
12812
Gene Ontology
biological_process unknown
|
Cajal body
|
female germ cell nucleus
|
protein binding
Human Homolog
COIL[coilin]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 60 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGAAAAAAA (
10
)
8.2
0.0082
P8 Cb GC
GTGGAGGAAG (
7
)
4.9
0.0049
P8 Cb GC
AAGCTAAAGG
(
2
)
3.3
0.0033
P8 Cb GC
AGCAAGATGG
(
4
)
1.6
0.0016
P8 Cb GC
GTGAAGAAAA (
5
)
1.6
0.0016
Cb medulloblastoma
CTGAAAAAAA (
10
)
18.5
0.0185
Cb medulloblastoma
AGCAAGATGG
(
4
)
4.6
0.0046
Cb medulloblastoma
TATGTTCAGC
4.6
0.0046
P8 GC+1d culture
CTGAAAAAAA (
10
)
9.1
0.0091
P8 GC+1d culture
AAGCTAAAGG
(
2
)
2.3
0.0023
P8 GC+1d culture
GTGAAGAAAA (
5
)
2.3
0.0023
P8 GC+1d culture
AGCAAGATGG
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
CTGAAAAAAA (
10
)
15.2
0.0152
P8 GC+SHH+1d culture
GTGAAGAAAA (
5
)
3.5
0.0035
P8 GC+SHH+1d culture
AAGCTAAAGG
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
AGCAAGATGG
(
4
)
1.2
0.0012
3T3 fibroblasts
AGCAAGATGG
(
4
)
7
0.007
E15 cortex
CTGAAAAAAA (
10
)
4.9
0.0049
P1 cortex
AGCAAGATGG
(
4
)
4.5
0.0045
P1 cortex
CTGAAAAAAA (
10
)
4.5
0.0045
Hypothalamus
CTGAAAAAAA (
10
)
14.5
0.0145
Hypothalamus
GTGAAGAAAA (
5
)
3.6
0.0036
Hypothalamus
AGCAAGATGG
(
4
)
1.8
0.0018
E12.5 retina
CTGAAAAAAA (
10
)
9.4
0.0094
E12.5 retina
AGCAAGATGG
(
4
)
5.6
0.0056
E12.5 retina
AAGCTAAAGG
(
2
)
1.9
0.0019
E14.5 retina
CTGAAAAAAA (
10
)
5.5
0.0055
E14.5 retina
GTGAAGAAAA (
5
)
5.5
0.0055
E14.5 retina
AAGCTAAAGG
(
2
)
1.8
0.0018
E14.5 retina
TATGTTCAGC
1.8
0.0018
E16.5 retina
AAGCTAAAGG
(
2
)
7.2
0.0072
E16.5 retina
CTGAAAAAAA (
10
)
7.2
0.0072
E16.5 retina
GTGAAGAAAA (
5
)
3.6
0.0036
E18.5 retina
CTGAAAAAAA (
10
)
25.5
0.0255
E18.5 retina
AAGCTAAAGG
(
2
)
3.6
0.0036
E18.5 retina
GTGAAGAAAA (
5
)
1.8
0.0018
P0.5 retina
CTGAAAAAAA (
10
)
5.9
0.0059
P0.5 retina
AGCAAGATGG
(
4
)
3.9
0.0039
P2.5 retina
CTGAAAAAAA (
10
)
21.1
0.0211
P2.5 retina
AGCAAGATGG
(
4
)
5.3
0.0053
P2.5 retina
AAGCTAAAGG
(
2
)
3.5
0.0035
P2.5 retina
GTGAAGAAAA (
5
)
1.8
0.0018
P4.5 retina
CTGAAAAAAA (
10
)
7.9
0.0079
P4.5 retina
AGCAAGATGG
(
4
)
2
0.002
P6.5 retina
CTGAAAAAAA (
10
)
15
0.015
P6.5 retina
AGCAAGATGG
(
4
)
3.3
0.0033
P6.5 retina
AAGCTAAAGG
(
2
)
1.7
0.0017
P6.5 retina
GTGAAGAAAA (
5
)
1.7
0.0017
P10.5 crx- retina
AGCAAGATGG
(
4
)
9.3
0.0093
P10.5 crx- retina
CTGAAAAAAA (
10
)
7.4
0.0074
P10.5 crx- retina
AAGCTAAAGG
(
2
)
5.6
0.0056
P10.5 crx+ retina
CTGAAAAAAA (
10
)
5.8
0.0058
P10.5 crx+ retina
AGCAAGATGG
(
4
)
3.8
0.0038
P10.5 crx+ retina
GTGAAGAAAA (
5
)
1.9
0.0019
Adult retinal
CTGAAAAAAA (
10
)
7.4
0.0074
Adult retinal
AGCAAGATGG
(
4
)
3.7
0.0037
Adult retinal
AAGCTAAAGG
(
2
)
1.9
0.0019
Adult retinal
GTGGAGGAAG (
7
)
1.9
0.0019
ONL
CTGAAAAAAA (
10
)
3.8
0.0038
ONL
AGCAAGATGG
(
4
)
1.9
0.0019
