Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.268105
1110049L02Rik
RIKEN cDNA 1110049L02 gene
9
68761
Mm.268105
AA690169
expressed sequence AA690169
9
102426
Mm.268105
C230081A13Rik
RIKEN cDNA C230081A13 gene
9
244895
Mm.268105
C81615
expressed sequence C81615
9
97548
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 56 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTTTTTTAAA (
10
)
6.5
0.0065
P8 Cb GC
TTTTTTTTTT (
433
)
4.9
0.0049
P8 Cb GC
AACTGCTTTT (
8
)
1.6
0.0016
P8 Cb GC
GCACTGCCCT
(
11
)
1.6
0.0016
Cb medulloblastoma
GTTTTTTAAA (
10
)
9.2
0.0092
Cb medulloblastoma
TTTTTTTTTT (
433
)
2.3
0.0023
P8 GC+1d culture
TTTTTTTTTT (
433
)
13.7
0.0137
P8 GC+1d culture
GTTTTTTAAA (
10
)
11.4
0.0114
P8 GC+1d culture
GCACTGCCCT
(
11
)
1.1
0.0011
P8 GC+SHH+1d culture
GTTTTTTAAA (
10
)
14.1
0.0141
P8 GC+SHH+1d culture
TTTTTTTTTT (
433
)
5.9
0.0059
P8 GC+SHH+1d culture
CTGGAGCTAG (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
GCACTGCCCT
(
11
)
1.2
0.0012
3T3 fibroblasts
GCACTGCCCT
(
11
)
14
0.014
E15 cortex
GTTTTTTAAA (
10
)
4.9
0.0049
E15 cortex
TAGGTGCTAG (
7
)
4.9
0.0049
E15 cortex
TTTTTTTTTT (
433
)
4.9
0.0049
P1 cortex
CTGGAGCTAG (
5
)
18.2
0.0182
P1 cortex
AACTGCTTTT (
8
)
4.5
0.0045
P1 cortex
GTTTTTTAAA (
10
)
4.5
0.0045
P1 cortex
TTTTTTTTTT (
433
)
4.5
0.0045
Hypothalamus
TTTTTTTTTT (
433
)
7.2
0.0072
Hypothalamus
GTTTTTTAAA (
10
)
1.8
0.0018
E12.5 retina
GTTTTTTAAA (
10
)
11.3
0.0113
E12.5 retina
TTTTTTTTTT (
433
)
7.5
0.0075
E14.5 retina
TTTTTTTTTT (
433
)
23.7
0.0237
E14.5 retina
GTTTTTTAAA (
10
)
9.1
0.0091
E14.5 retina
TAGGTGCTAG (
7
)
1.8
0.0018
E16.5 retina
GTTTTTTAAA (
10
)
5.4
0.0054
E16.5 retina
TTTTTTTTTT (
433
)
5.4
0.0054
E16.5 retina
TAGGTGCTAG (
7
)
1.8
0.0018
E18.5 retina
TTTTTTTTTT (
433
)
10.9
0.0109
E18.5 retina
GTTTTTTAAA (
10
)
9.1
0.0091
E18.5 retina
TAGGTGCTAG (
7
)
3.6
0.0036
P0.5 retina
TTTTTTTTTT (
433
)
9.8
0.0098
P0.5 retina
GTTTTTTAAA (
10
)
5.9
0.0059
P0.5 retina
CTGGAGCTAG (
5
)
2
0.002
P2.5 retina
GTTTTTTAAA (
10
)
15.8
0.0158
P2.5 retina
TTTTTTTTTT (
433
)
7
0.007
P2.5 retina
CTGGAGCTAG (
5
)
1.8
0.0018
P4.5 retina
GTTTTTTAAA (
10
)
17.8
0.0178
P4.5 retina
TTTTTTTTTT (
433
)
9.9
0.0099
P6.5 retina
TTTTTTTTTT (
433
)
8.3
0.0083
P6.5 retina
GTTTTTTAAA (
10
)
6.7
0.0067
P6.5 retina
CTGGAGCTAG (
5
)
1.7
0.0017
P6.5 retina
TAGGTGCTAG (
7
)
1.7
0.0017
P10.5 crx- retina
AACTGCTTTT (
8
)
3.7
0.0037
P10.5 crx- retina
GTTTTTTAAA (
10
)
3.7
0.0037
P10.5 crx+ retina
GTTTTTTAAA (
10
)
9.6
0.0096
P10.5 crx+ retina
TTTTTTTTTT (
433
)
3.8
0.0038
Adult retinal
TTTTTTTTTT (
433
)
7.4
0.0074
Adult retinal
GTTTTTTAAA (
10
)
3.7
0.0037
Adult retinal
AACTGCTTTT (
8
)
1.9
0.0019
Adult retinal
CTGGAGCTAG (
5
)
1.9
0.0019
ONL
GTTTTTTAAA (
10
)
9.6
0.0096
ONL
TTTTTTTTTT (
433
)
3.8
0.0038
