Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.268163	1700027A13Rik	RIKEN cDNA 1700027A13 gene	8		69447
Mm.268163	2900027M19Rik	RIKEN cDNA 2900027M19 gene	8		72880
Mm.268163	AU022229	expressed sequence AU022229	8		102234
Mm.268163	AW121567	expressed sequence AW121567	8	8 A1.1	270028
Mm.268163	4930435N07Rik	RIKEN cDNA 4930435N07 gene	8		75797
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 7 In Situ Hybridization Images

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SAGE Tags

Total 41 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma CACACAGACT (6) 2.3 0.0023 P8 GC+1d culture CACACAGACT (6) 2.3 0.0023 P8 GC+1d culture ATGCAGAGGA (7) 1.1 0.0011 P8 GC+1d culture ATGGAAAGGA (8) 1.1 0.0011 P8 GC+SHH+1d culture CACACAGACT (6) 5.9 0.0059 P8 GC+SHH+1d culture ATGGAAAGGA (8) 1.2 0.0012 P8 GC+SHH+1d culture CGTACAGTAT (5) 1.2 0.0012 3T3 fibroblasts CACACAGACT (6) 17.5 0.0175 3T3 fibroblasts ATGGAAAGGA (8) 3.5 0.0035 E15 cortex CGTACAGTAT (5) 4.9 0.0049 P1 cortex CACACAGACT (6) 22.7 0.0227 P1 cortex CGTACAGTAT (5) 4.5 0.0045 Hypothalamus ATGCAGAGGA (7) 1.8 0.0018 Hypothalamus CACACAGACT (6) 1.8 0.0018 Hypothalamus GACACAGCCG (5) 1.8 0.0018 Hypothalamus GCCCACTGCC (8) 1.8 0.0018 Hypothalamus GGTTGGAAGG (6) 1.8 0.0018 E12.5 retina CACACAGACT (6) 3.8 0.0038 E14.5 retina CACACAGACT (6) 1.8 0.0018 E14.5 retina GCCCACTGCC (8) 1.8 0.0018 E14.5 retina GGTTGGAAGG (6) 1.8 0.0018 E16.5 retina ATGGAAAGGA (8) 1.8 0.0018 E16.5 retina CACACAGACT (6) 1.8 0.0018 P0.5 retina CACACAGACT (6) 2 0.002 P2.5 retina CACACAGACT (6) 5.3 0.0053 P2.5 retina ATGCAGAGGA (7) 1.8 0.0018 P4.5 retina ATGGAAAGGA (8) 4 0.004 P4.5 retina CACACAGACT (6) 4 0.004 P4.5 retina GACACAGCCG (5) 2 0.002 P6.5 retina CACACAGACT (6) 3.3 0.0033 P6.5 retina CGTACAGTAT (5) 3.3 0.0033 P6.5 retina GGTTGGAAGG (6) 3.3 0.0033 P10.5 crx- retina CACACAGACT (6) 9.3 0.0093 P10.5 crx- retina GCCCACTGCC (8) 3.7 0.0037 P10.5 crx- retina CGTACAGTAT (5) 1.9 0.0019 P10.5 crx+ retina CACACAGACT (6) 5.8 0.0058 P10.5 crx+ retina CGTACAGTAT (5) 1.9 0.0019 P10.5 crx+ retina GACACAGCCG (5) 1.9 0.0019 Adult retinal CACACAGACT (6) 3.7 0.0037 Adult retinal GACACAGCCG (5) 1.9 0.0019 ONL CACACAGACT (6) 1.9 0.0019