Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.268357
Vgll4
vestigial like 4 (Drosophila)
6
232334
Mm.268357
A530060M17Rik
RIKEN cDNA A530060M17 gene
6
319495
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 49 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTGTGTGTG (
115
)
27.7
0.0277
P8 Cb GC
GTTTGCCTGA
(
9
)
1.6
0.0016
Cb medulloblastoma
TGTGTGTGTG (
115
)
30.1
0.0301
Cb medulloblastoma
TTGAACAGGG (
4
)
4.6
0.0046
P8 GC+1d culture
TGTGTGTGTG (
115
)
27.4
0.0274
P8 GC+1d culture
GTTTGCCTGA
(
9
)
2.3
0.0023
P8 GC+1d culture
TGGTCACACA (
6
)
2.3
0.0023
P8 GC+1d culture
CATTGTCTTT (
6
)
1.1
0.0011
P8 GC+SHH+1d culture
TGTGTGTGTG (
115
)
28.1
0.0281
P8 GC+SHH+1d culture
CATTGTCTTT (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
CAGAGGCCAG (
4
)
1.2
0.0012
3T3 fibroblasts
TGTGTGTGTG (
115
)
28
0.028
3T3 fibroblasts
GTTTGCCTGA
(
9
)
10.5
0.0105
E15 cortex
GTTTGCCTGA
(
9
)
9.9
0.0099
P1 cortex
TGTGTGTGTG (
115
)
18.2
0.0182
P1 cortex
GTTTGCCTGA
(
9
)
4.5
0.0045
P1 cortex
TTGAACAGGG (
4
)
4.5
0.0045
Hypothalamus
TGTGTGTGTG (
115
)
25.4
0.0254
Hypothalamus
TTGAACAGGG (
4
)
9.1
0.0091
E12.5 retina
TGTGTGTGTG (
115
)
43.2
0.0432
E12.5 retina
TTGAACAGGG (
4
)
3.8
0.0038
E12.5 retina
CAGAGGCCAG (
4
)
1.9
0.0019
E14.5 retina
TGTGTGTGTG (
115
)
54.7
0.0547
E14.5 retina
GTTTGCCTGA
(
9
)
3.6
0.0036
E14.5 retina
TTGAACAGGG (
4
)
1.8
0.0018
E16.5 retina
TGTGTGTGTG (
115
)
39.8
0.0398
E16.5 retina
TGGTCACACA (
6
)
1.8
0.0018
E16.5 retina
TTGAACAGGG (
4
)
1.8
0.0018
E18.5 retina
TGTGTGTGTG (
115
)
47.3
0.0473
E18.5 retina
GTTTGCCTGA
(
9
)
1.8
0.0018
E18.5 retina
TTGAACAGGG (
4
)
1.8
0.0018
P0.5 retina
TGTGTGTGTG (
115
)
21.6
0.0216
P0.5 retina
GTTTGCCTGA
(
9
)
2
0.002
P0.5 retina
TTGAACAGGG (
4
)
2
0.002
P2.5 retina
TGTGTGTGTG (
115
)
35.2
0.0352
P2.5 retina
CATTGTCTTT (
6
)
3.5
0.0035
P2.5 retina
GTTTGCCTGA
(
9
)
1.8
0.0018
P4.5 retina
TGTGTGTGTG (
115
)
47.6
0.0476
P4.5 retina
GTTTGCCTGA
(
9
)
2
0.002
P6.5 retina
TGTGTGTGTG (
115
)
41.7
0.0417
P6.5 retina
CATTGTCTTT (
6
)
1.7
0.0017
P10.5 crx- retina
TGTGTGTGTG (
115
)
59.4
0.0594
P10.5 crx- retina
GTTTGCCTGA
(
9
)
1.9
0.0019
P10.5 crx+ retina
TGTGTGTGTG (
115
)
44.2
0.0442
P10.5 crx+ retina
GTTTGCCTGA
(
9
)
3.8
0.0038
P10.5 crx+ retina
TTGAACAGGG (
4
)
3.8
0.0038
Adult retinal
TGTGTGTGTG (
115
)
53.7
0.0537
Adult retinal
CAGAGGCCAG (
4
)
3.7
0.0037
ONL
TGTGTGTGTG (
115
)
23
0.023
