Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.268397	D330026I07Rik	RIKEN cDNA D330026I07 gene	16		319401
Mm.268397	Cdgap	Cdc42 GTPase-activating protein	16	16 A1	12549
Gene Ontology	GTPase activator activity | lamellipodium | protein binding | SH3-domain binding | small GTPase mediated signal transduction
Human Homolog	CDGAP[KIAA1204 protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 9 In Situ Hybridization Images

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SAGE Tags

Total 43 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC GCAGAAAGCA (10) 4.9 0.0049 P8 Cb GC TATCCCTGGG (5) 3.3 0.0033 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture GCAGAAAGCA (10) 2.3 0.0023 P8 GC+1d culture ACCTGGAAAA (5) 1.1 0.0011 P8 GC+1d culture TGGTTTTTAT (3) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture GCAGAAAGCA (10) 2.3 0.0023 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 E15 cortex CCTTTAATCC (355) 54.4 0.0544 P1 cortex CCTTTAATCC (355) 154.5 0.1545 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus GCAGAAAGCA (10) 1.8 0.0018 Hypothalamus TATCCCTGGG (5) 1.8 0.0018 Hypothalamus TGGTTTTTAT (3) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina GCAGAAAGCA (10) 3.8 0.0038 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina TGGTTTTTAT (3) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina GCAGAAAGCA (10) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina GCAGAAAGCA (10) 3.6 0.0036 E18.5 retina TGGTTTTTAT (3) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina GCAGAAAGCA (10) 2 0.002 P0.5 retina TATCCCTGGG (5) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina GCAGAAAGCA (10) 5.3 0.0053 P2.5 retina ACCTGGAAAA (5) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina GCAGAAAGCA (10) 13.9 0.0139 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina GCAGAAAGCA (10) 25 0.025 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina GCAGAAAGCA (10) 13 0.013 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina ACCTGGAAAA (5) 5.8 0.0058 Adult retinal CCTTTAATCC (355) 129.6 0.1296 ONL CCTTTAATCC (355) 84.3 0.0843 ONL GCAGAAAGCA (10) 3.8 0.0038