Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.268462	Zc3hdc1	zinc finger CCCH type domain containing 1	6		243771
Gene Ontology	nucleic acid binding | nucleus
Human Homolog	ZC3HDC1[zinc finger CCCH type domain containing 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 38 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGTATATG (5) 17.9 0.0179 Cb medulloblastoma TGTGTATATG (5) 4.6 0.0046 Cb medulloblastoma TCCGACCCAA 2.3 0.0023 P8 GC+1d culture TGTGTATATG (5) 32 0.032 P8 GC+1d culture GGGCCTGTGG (8) 10.3 0.0103 P8 GC+SHH+1d culture TGTGTATATG (5) 25.8 0.0258 P8 GC+SHH+1d culture GGGCCTGTGG (8) 5.9 0.0059 P8 GC+SHH+1d culture TCCGACCCAA 1.2 0.0012 3T3 fibroblasts GGGCCTGTGG (8) 14 0.014 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts TGTGTATATG (5) 10.5 0.0105 3T3 fibroblasts TCCGACCCAA 7 0.007 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex TGTGTATATG (5) 13.6 0.0136 Hypothalamus GGGCCTGTGG (8) 3.6 0.0036 Hypothalamus TGTGTATATG (5) 1.8 0.0018 E12.5 retina TGTGTATATG (5) 5.6 0.0056 E14.5 retina TGTGTATATG (5) 7.3 0.0073 E16.5 retina TGTGTATATG (5) 21.7 0.0217 E16.5 retina CGCGCGGTGA 1.8 0.0018 E18.5 retina TGTGTATATG (5) 9.1 0.0091 P0.5 retina TGTGTATATG (5) 27.5 0.0275 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina CGCGCGGTGA 2 0.002 P2.5 retina TGTGTATATG (5) 14.1 0.0141 P2.5 retina CGCGCGGTGA 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina TGTGTATATG (5) 11.9 0.0119 P4.5 retina CGCGCGGTGA 4 0.004 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina TGTGTATATG (5) 5 0.005 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina CGCGCGGTGA 1.7 0.0017 P10.5 crx- retina TGTGTATATG (5) 3.7 0.0037 Adult retinal GGGCCTGTGG (8) 3.7 0.0037 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TGTGTATATG (5) 3.8 0.0038