Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.268863	Txln	taxilin	4	4 59.0 cM	109658
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCAAAAAAAA (50) 14.7 0.0147 P8 Cb GC AAGGAGCTGT (5) 6.5 0.0065 P8 Cb GC GGGAAAGAGG (3) 1.6 0.0016 P8 Cb GC TGTGGACCAC (5) 1.6 0.0016 Cb medulloblastoma GCAAAAAAAA (50) 60.1 0.0601 Cb medulloblastoma GGGACAGAGG (5) 2.3 0.0023 P8 GC+1d culture GCAAAAAAAA (50) 12.6 0.0126 P8 GC+1d culture TCAGCCCCAC (4) 8 0.008 P8 GC+1d culture AAGGAGCTGT (5) 4.6 0.0046 P8 GC+SHH+1d culture GCAAAAAAAA (50) 29.3 0.0293 P8 GC+SHH+1d culture AAGGAGCTGT (5) 7 0.007 P8 GC+SHH+1d culture TCAGCCCCAC (4) 3.5 0.0035 P8 GC+SHH+1d culture ACTGCTTTCC (3) 1.2 0.0012 P8 GC+SHH+1d culture TGTGGACCAC (5) 1.2 0.0012 3T3 fibroblasts GCAAAAAAAA (50) 3.5 0.0035 3T3 fibroblasts TCAGCCCCAC (4) 3.5 0.0035 E15 cortex GCAAAAAAAA (50) 9.9 0.0099 E15 cortex TCAGCCCCAC (4) 4.9 0.0049 P1 cortex GCAAAAAAAA (50) 4.5 0.0045 Hypothalamus GCAAAAAAAA (50) 19.9 0.0199 Hypothalamus AAGGAGCTGT (5) 1.8 0.0018 Hypothalamus CAGGCTTCCA (3) 1.8 0.0018 Hypothalamus GGGACAGAGG (5) 1.8 0.0018 E12.5 retina GCAAAAAAAA (50) 9.4 0.0094 E12.5 retina TCAGCCCCAC (4) 7.5 0.0075 E12.5 retina ACTGCTTTCC (3) 1.9 0.0019 E14.5 retina GCAAAAAAAA (50) 12.8 0.0128 E14.5 retina TCAGCCCCAC (4) 3.6 0.0036 E14.5 retina AAGGAGCTGT (5) 1.8 0.0018 E14.5 retina CAGGCTTCCA (3) 1.8 0.0018 E14.5 retina GGGACAGAGG (5) 1.8 0.0018 E16.5 retina GCAAAAAAAA (50) 10.9 0.0109 E16.5 retina TCAGCCCCAC (4) 3.6 0.0036 E16.5 retina GGGAAAGAGG (3) 1.8 0.0018 E18.5 retina GCAAAAAAAA (50) 25.5 0.0255 E18.5 retina AAGGAGCTGT (5) 7.3 0.0073 E18.5 retina CAGGCTTCCA (3) 5.5 0.0055 E18.5 retina TCAGCCCCAC (4) 1.8 0.0018 P0.5 retina GCAAAAAAAA (50) 17.7 0.0177 P0.5 retina TCAGCCCCAC (4) 9.8 0.0098 P0.5 retina AAGGAGCTGT (5) 2 0.002 P0.5 retina ACTGCTTTCC (3) 2 0.002 P0.5 retina GGGACAGAGG (5) 2 0.002 P0.5 retina TAAGTGCTGG 2 0.002 P2.5 retina GCAAAAAAAA (50) 22.9 0.0229 P2.5 retina TCAGCCCCAC (4) 12.3 0.0123 P2.5 retina AAGGAGCTGT (5) 5.3 0.0053 P2.5 retina ACTGCTTTCC (3) 5.3 0.0053 P4.5 retina GCAAAAAAAA (50) 25.8 0.0258 P4.5 retina AAGGAGCTGT (5) 5.9 0.0059 P4.5 retina ACTGCTTTCC (3) 4 0.004 P4.5 retina CAGGCTTCCA (3) 4 0.004 P4.5 retina TCAGCCCCAC (4) 4 0.004 P6.5 retina GCAAAAAAAA (50) 11.7 0.0117 P6.5 retina GGGACAGAGG (5) 11.7 0.0117 P6.5 retina TCAGCCCCAC (4) 5 0.005 P6.5 retina TAAGTGCTGG 1.7 0.0017 P10.5 crx- retina GCAAAAAAAA (50) 5.6 0.0056 P10.5 crx- retina GGGACAGAGG (5) 5.6 0.0056 P10.5 crx- retina AAGGAGCTGT (5) 1.9 0.0019 P10.5 crx+ retina GGGACAGAGG (5) 267.2 0.2672 P10.5 crx+ retina AAGGAGCTGT (5) 1.9 0.0019 P10.5 crx+ retina GCAAAAAAAA (50) 1.9 0.0019 P10.5 crx+ retina TCAGCCCCAC (4) 1.9 0.0019 P10.5 crx+ retina TGTGGACCAC (5) 1.9 0.0019 Adult retinal GGGACAGAGG (5) 488.8 0.4888 Adult retinal GCAAAAAAAA (50) 11.1 0.0111 Adult retinal TCAGCCCCAC (4) 3.7 0.0037 Adult retinal AAGGAGCTGT (5) 1.9 0.0019 Adult retinal ACTGCTTTCC (3) 1.9 0.0019 Adult retinal TAAGTGCTGG 1.9 0.0019 ONL GGGACAGAGG (5) 879.2 0.8792 ONL AAGGAGCTGT (5) 5.7 0.0057 ONL TCAGCCCCAC (4) 5.7 0.0057 ONL ACTGCTTTCC (3) 3.8 0.0038 ONL TAAGTGCTGG 3.8 0.0038 ONL GCAAAAAAAA (50) 1.9 0.0019