Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.269029
2010007L18Rik
RIKEN cDNA 2010007L18 gene
8
66432
Mm.269029
2400002F02Rik
RIKEN cDNA 2400002F02 gene
8
69701
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 53 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCCACCCACT (
6
)
8.2
0.0082
Cb medulloblastoma
CCCACCCACT (
6
)
11.6
0.0116
P8 GC+1d culture
CCCACCCACT (
6
)
4.6
0.0046
P8 GC+1d culture
TTCTGTGTAT (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
CCCACCCACT (
6
)
9.4
0.0094
P8 GC+SHH+1d culture
TTCTGTGTAT (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
GTTAAAAATG (
8
)
1.2
0.0012
P8 GC+SHH+1d culture
TCTGTAATTC
(
6
)
1.2
0.0012
3T3 fibroblasts
CCCACCCACT (
6
)
17.5
0.0175
3T3 fibroblasts
AGGCAAATCA (
3
)
3.5
0.0035
E15 cortex
CCCACCCACT (
6
)
14.8
0.0148
E15 cortex
TCTTTCCCCC
(
3
)
4.9
0.0049
P1 cortex
CCCACCCACT (
6
)
4.5
0.0045
P1 cortex
TCTTTCCCCC
(
3
)
4.5
0.0045
Hypothalamus
CCCACCCACT (
6
)
14.5
0.0145
Hypothalamus
AGGCAAATCA (
3
)
1.8
0.0018
Hypothalamus
TCTTTCCCCC
(
3
)
1.8
0.0018
Hypothalamus
TTCTGTGTAT (
6
)
1.8
0.0018
E12.5 retina
TCTTTCCCCC
(
3
)
3.8
0.0038
E12.5 retina
CCCACCCACT (
6
)
1.9
0.0019
E12.5 retina
GTTAAAAATG (
8
)
1.9
0.0019
E12.5 retina
TAGTTCACCA
(
2
)
1.9
0.0019
E14.5 retina
CCCACCCACT (
6
)
3.6
0.0036
E14.5 retina
TCTTTCCCCC
(
3
)
3.6
0.0036
E14.5 retina
AGGCAAATCA (
3
)
1.8
0.0018
E14.5 retina
TAGTTCACCA
(
2
)
1.8
0.0018
E14.5 retina
TCTGTAATTC
(
6
)
1.8
0.0018
E16.5 retina
CCCACCCACT (
6
)
7.2
0.0072
E16.5 retina
TAGTTCACCA
(
2
)
1.8
0.0018
E16.5 retina
TCTGTAATTC
(
6
)
1.8
0.0018
E16.5 retina
TCTTTCCCCC
(
3
)
1.8
0.0018
E18.5 retina
TCTTTCCCCC
(
3
)
1.8
0.0018
P0.5 retina
CCCACCCACT (
6
)
9.8
0.0098
P0.5 retina
TCTTTCCCCC
(
3
)
5.9
0.0059
P2.5 retina
CCCACCCACT (
6
)
8.8
0.0088
P2.5 retina
TCTTTCCCCC
(
3
)
5.3
0.0053
P2.5 retina
GTTAAAAATG (
8
)
1.8
0.0018
P2.5 retina
TCTGTAATTC
(
6
)
1.8
0.0018
P4.5 retina
CCCACCCACT (
6
)
2
0.002
P4.5 retina
TCTTTCCCCC
(
3
)
2
0.002
P6.5 retina
CCCACCCACT (
6
)
10
0.01
P6.5 retina
TCTTTCCCCC
(
3
)
5
0.005
P6.5 retina
AGGCAAATCA (
3
)
1.7
0.0017
P10.5 crx- retina
CCCACCCACT (
6
)
24.2
0.0242
P10.5 crx- retina
AGGCAAATCA (
3
)
3.7
0.0037
P10.5 crx- retina
TAGTTCACCA
(
2
)
1.9
0.0019
P10.5 crx- retina
TCTTTCCCCC
(
3
)
1.9
0.0019
P10.5 crx- retina
TTCTGTGTAT (
6
)
1.9
0.0019
P10.5 crx+ retina
CCCACCCACT (
6
)
11.5
0.0115
Adult retinal
CCCACCCACT (
6
)
13
0.013
Adult retinal
AGGCAAATCA (
3
)
1.9
0.0019
ONL
CCCACCCACT (
6
)
5.7
0.0057
ONL
AGGCAAATCA (
3
)
1.9
0.0019
