Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.269188
Nutf2-ps1
nuclear transport factor 2, pseudogene 1
19
19 33.0 cM
18228
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 59 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATACAATAAA
(
5
)
19.6
0.0196
P8 Cb GC
ATCCAATAAA
11.4
0.0114
P8 Cb GC
AGGCATTGAA (
2
)
4.9
0.0049
Cb medulloblastoma
ATACAATAAA
(
5
)
6.9
0.0069
Cb medulloblastoma
AGGCATTGAA (
2
)
4.6
0.0046
P8 GC+1d culture
ATCCAATAAA
9.1
0.0091
P8 GC+1d culture
ATACAATAAA
(
5
)
8
0.008
P8 GC+1d culture
AGGCATTGAA (
2
)
4.6
0.0046
P8 GC+1d culture
CCTTGGAAAG
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
ATACAATAAA
(
5
)
18.7
0.0187
P8 GC+SHH+1d culture
ATCCAATAAA
9.4
0.0094
P8 GC+SHH+1d culture
AGGCATTGAA (
2
)
2.3
0.0023
P8 GC+SHH+1d culture
CCTTGAAAGA (
3
)
1.2
0.0012
3T3 fibroblasts
ATACAATAAA
(
5
)
3.5
0.0035
P1 cortex
ATACAATAAA
(
5
)
13.6
0.0136
Hypothalamus
ATACAATAAA
(
5
)
10.9
0.0109
Hypothalamus
AGGCATTGAA (
2
)
5.4
0.0054
E12.5 retina
ATACAATAAA
(
5
)
22.5
0.0225
E12.5 retina
AGGCATTGAA (
2
)
15
0.015
E12.5 retina
ATCCAATAAA
1.9
0.0019
E12.5 retina
CCTTGAAAGA (
3
)
1.9
0.0019
E12.5 retina
CCTTGGAAAG
(
4
)
1.9
0.0019
E14.5 retina
ATACAATAAA
(
5
)
69.2
0.0692
E14.5 retina
AGGCATTGAA (
2
)
12.8
0.0128
E14.5 retina
CCTTGGAAAG
(
4
)
5.5
0.0055
E16.5 retina
ATACAATAAA
(
5
)
34.4
0.0344
E16.5 retina
AGGCATTGAA (
2
)
12.7
0.0127
E16.5 retina
ATCCAATAAA
3.6
0.0036
E16.5 retina
CCTTGGAAAG
(
4
)
1.8
0.0018
E18.5 retina
ATACAATAAA
(
5
)
61.8
0.0618
E18.5 retina
AGGCATTGAA (
2
)
16.4
0.0164
E18.5 retina
CCTTGGAAAG
(
4
)
3.6
0.0036
E18.5 retina
ATCCAATAAA
1.8
0.0018
P0.5 retina
ATACAATAAA
(
5
)
11.8
0.0118
P0.5 retina
AGGCATTGAA (
2
)
5.9
0.0059
P2.5 retina
ATACAATAAA
(
5
)
14.1
0.0141
P2.5 retina
AGGCATTGAA (
2
)
5.3
0.0053
P2.5 retina
CCTTGGAAAG
(
4
)
3.5
0.0035
P2.5 retina
ATCCAATAAA
1.8
0.0018
P2.5 retina
TTCAGGCTTT (
2
)
1.8
0.0018
P4.5 retina
ATACAATAAA
(
5
)
23.8
0.0238
P4.5 retina
AGGCATTGAA (
2
)
7.9
0.0079
P4.5 retina
ATCCAATAAA
7.9
0.0079
P4.5 retina
CCTTGGAAAG
(
4
)
2
0.002
P6.5 retina
AAATACCTGA (
17
)
8.3
0.0083
P6.5 retina
ATACAATAAA
(
5
)
3.3
0.0033
P6.5 retina
ATCCAATAAA
1.7
0.0017
P6.5 retina
CCTTGGAAAG
(
4
)
1.7
0.0017
P10.5 crx- retina
AAATACCTGA (
17
)
48.3
0.0483
P10.5 crx- retina
AGGCATTGAA (
2
)
9.3
0.0093
P10.5 crx- retina
TTCAGGCTTT (
2
)
3.7
0.0037
P10.5 crx- retina
ATACAATAAA
(
5
)
1.9
0.0019
P10.5 crx- retina
CCTTGAAAGA (
3
)
1.9
0.0019
P10.5 crx+ retina
AAATACCTGA (
17
)
21.1
0.0211
P10.5 crx+ retina
ATACAATAAA
(
5
)
1.9
0.0019
Adult retinal
TTCAGGCTTT (
2
)
5.6
0.0056
Adult retinal
AAATACCTGA (
17
)
3.7
0.0037
ONL
AAATACCTGA (
17
)
15.3
0.0153
ONL
ATACAATAAA
(
5
)
7.7
0.0077
