Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.269211
Map3k10
mitogen activated protein kinase kinase kinase 10
7
269881
Mm.269211
1500037F05Rik
RIKEN cDNA 1500037F05 gene
7
76690
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 75 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTGTAATCC (
34
)
6.5
0.0065
P8 Cb GC
TTTTTTTTTT (
433
)
4.9
0.0049
P8 Cb GC
GAGGAGGAGG (
35
)
1.6
0.0016
P8 Cb GC
GGGGAGGGGC (
5
)
1.6
0.0016
Cb medulloblastoma
CCTGTAATCC (
34
)
11.6
0.0116
Cb medulloblastoma
AATGTAGCGC
(
2
)
2.3
0.0023
Cb medulloblastoma
TTTTTTTTTT (
433
)
2.3
0.0023
P8 GC+1d culture
TTTTTTTTTT (
433
)
13.7
0.0137
P8 GC+1d culture
GGGGAGGGGC (
5
)
2.3
0.0023
P8 GC+1d culture
CCTGTAATCC (
34
)
1.1
0.0011
P8 GC+1d culture
GCCCCAGGCT (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TTTTTTTTTT (
433
)
5.9
0.0059
P8 GC+SHH+1d culture
CCTGTAATCC (
34
)
4.7
0.0047
P8 GC+SHH+1d culture
GAGGAGGAGG (
35
)
1.2
0.0012
3T3 fibroblasts
CCTGTAATCC (
34
)
10.5
0.0105
3T3 fibroblasts
AATGTAGCGC
(
2
)
3.5
0.0035
3T3 fibroblasts
GAGGAGGAGG (
35
)
3.5
0.0035
E15 cortex
CCTGTAATCC (
34
)
4.9
0.0049
E15 cortex
GAGGAGGAGG (
35
)
4.9
0.0049
E15 cortex
TTTTTTTTTT (
433
)
4.9
0.0049
P1 cortex
CCTGTAATCC (
34
)
13.6
0.0136
P1 cortex
AATGTAGCGC
(
2
)
4.5
0.0045
P1 cortex
GAGGAGGAGG (
35
)
4.5
0.0045
P1 cortex
TTTTTTTTTT (
433
)
4.5
0.0045
Hypothalamus
GAGGAGGAGG (
35
)
7.2
0.0072
Hypothalamus
TTTTTTTTTT (
433
)
7.2
0.0072
Hypothalamus
CCTGTAATCC (
34
)
5.4
0.0054
Hypothalamus
GCCCCAGGCT (
3
)
1.8
0.0018
E12.5 retina
TTTTTTTTTT (
433
)
7.5
0.0075
E12.5 retina
CCTGTAATCC (
34
)
3.8
0.0038
E12.5 retina
AATGTAGCGC
(
2
)
1.9
0.0019
E12.5 retina
GAGGAGGAGG (
35
)
1.9
0.0019
E14.5 retina
TTTTTTTTTT (
433
)
23.7
0.0237
E14.5 retina
CCTGTAATCC (
34
)
5.5
0.0055
E14.5 retina
GGGGAGGGGC (
5
)
1.8
0.0018
E16.5 retina
TTTTTTTTTT (
433
)
5.4
0.0054
E16.5 retina
CCTGTAATCC (
34
)
3.6
0.0036
E16.5 retina
GCCCCAGGCT (
3
)
1.8
0.0018
E18.5 retina
TTTTTTTTTT (
433
)
10.9
0.0109
E18.5 retina
CCTGTAATCC (
34
)
1.8
0.0018
P0.5 retina
TTTTTTTTTT (
433
)
9.8
0.0098
P0.5 retina
CCTGTAATCC (
34
)
3.9
0.0039
P0.5 retina
AATGTAGCGC
(
2
)
2
0.002
P2.5 retina
TTTTTTTTTT (
433
)
7
0.007
P2.5 retina
CCTGTAATCC (
34
)
3.5
0.0035
P2.5 retina
AATGTAGCGC
(
2
)
1.8
0.0018
P2.5 retina
GAGGAGGAGG (
35
)
1.8
0.0018
P2.5 retina
GGGGAGGGGC (
5
)
1.8
0.0018
P4.5 retina
TTTTTTTTTT (
433
)
9.9
0.0099
P4.5 retina
CCTGTAATCC (
34
)
5.9
0.0059
P4.5 retina
AATGTAGCGC
(
2
)
2
0.002
P4.5 retina
GAGGAGGAGG (
35
)
2
0.002
P6.5 retina
TTTTTTTTTT (
433
)
8.3
0.0083
P6.5 retina
CCTGTAATCC (
34
)
1.7
0.0017
P10.5 crx- retina
AATGTAGCGC
(
2
)
3.7
0.0037
P10.5 crx- retina
CCTGTAATCC (
34
)
3.7
0.0037
P10.5 crx- retina
GAGGAGGAGG (
35
)
1.9
0.0019
P10.5 crx- retina
GCCCCAGGCT (
3
)
1.9
0.0019
P10.5 crx- retina
TTGAGTGTGA
(
2
)
1.9
0.0019
P10.5 crx+ retina
CCTGTAATCC (
34
)
3.8
0.0038
P10.5 crx+ retina
GGGGAGGGGC (
5
)
3.8
0.0038
P10.5 crx+ retina
TTTTTTTTTT (
433
)
3.8
0.0038
P10.5 crx+ retina
GAGTTTCGTG
(
2
)
1.9
0.0019
P10.5 crx+ retina
TTGAGTGTGA
(
2
)
1.9
0.0019
Adult retinal
TTTTTTTTTT (
433
)
7.4
0.0074
Adult retinal
CCTGTAATCC (
34
)
3.7
0.0037
Adult retinal
GAGGAGGAGG (
35
)
3.7
0.0037
Adult retinal
AATGTAGCGC
(
2
)
1.9
0.0019
Adult retinal
GAGTTTCGTG
(
2
)
1.9
0.0019
Adult retinal
TTGAGTGTGA
(
2
)
1.9
0.0019
ONL
CCTGTAATCC (
34
)
3.8
0.0038
ONL
TTTTTTTTTT (
433
)
3.8
0.0038
ONL
AATGTAGCGC
(
2
)
1.9
0.0019
ONL
GAGGAGGAGG (
35
)
1.9
0.0019
ONL
GAGTTTCGTG
(
2
)
1.9
0.0019
