Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.269384	Col9a2	procollagen, type IX, alpha 2	4	4 53.0 cM	12840
Gene Ontology	cell adhesion | collagen | collagen type IX | cytoplasm | extracellular matrix | extracellular matrix structural constituent | extracellular matrix structural constituent conferring tensile strength | extracellular space | phosphate transport | skeletal development
Human Homolog	COL9A2[collagen, type IX, alpha 2]

No In Situ Hybridization images could be found.



SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTTTTCAGCA (7) 4.9 0.0049 Cb medulloblastoma CTTTTCAGCA (7) 4.6 0.0046 P8 GC+1d culture CTTTTCAGCA (7) 19.4 0.0194 P8 GC+1d culture GCCATCCCGG (3) 8 0.008 P8 GC+1d culture GGACAGAAAG (5) 2.3 0.0023 P8 GC+SHH+1d culture CTTTTCAGCA (7) 14.1 0.0141 P8 GC+SHH+1d culture GCCATCCCGG (3) 7 0.007 P8 GC+SHH+1d culture GGACAGAAAG (5) 1.2 0.0012 3T3 fibroblasts CTTTTCAGCA (7) 14 0.014 3T3 fibroblasts GGACAGAAAG (5) 3.5 0.0035 E15 cortex CTTTTCAGCA (7) 14.8 0.0148 E15 cortex GCCATCCCGG (3) 4.9 0.0049 P1 cortex CTTTTCAGCA (7) 22.7 0.0227 P1 cortex GCCATCCCGG (3) 9.1 0.0091 Hypothalamus CTTTTCAGCA (7) 10.9 0.0109 E12.5 retina CTTTTCAGCA (7) 15 0.015 E12.5 retina GGACAGAAAG (5) 3.8 0.0038 E14.5 retina CTTTTCAGCA (7) 9.1 0.0091 E16.5 retina CTTTTCAGCA (7) 7.2 0.0072 E18.5 retina CTTTTCAGCA (7) 5.5 0.0055 E18.5 retina GCCATCCCGG (3) 1.8 0.0018 P0.5 retina CTTTTCAGCA (7) 9.8 0.0098 P0.5 retina GCCATCCCGG (3) 3.9 0.0039 P0.5 retina GGACAGAAAG (5) 2 0.002 P2.5 retina CTTTTCAGCA (7) 8.8 0.0088 P2.5 retina GCCATCCCGG (3) 8.8 0.0088 P4.5 retina CTTTTCAGCA (7) 5.9 0.0059 P4.5 retina GCCATCCCGG (3) 2 0.002 P6.5 retina GCCATCCCGG (3) 16.7 0.0167 P6.5 retina CTTTTCAGCA (7) 6.7 0.0067 P10.5 crx- retina CTTTTCAGCA (7) 5.6 0.0056 P10.5 crx- retina GCCATCCCGG (3) 1.9 0.0019 P10.5 crx+ retina CTTTTCAGCA (7) 11.5 0.0115 P10.5 crx+ retina GCCATCCCGG (3) 5.8 0.0058 P10.5 crx+ retina GGACAGAAAG (5) 1.9 0.0019 Adult retinal GCCATCCCGG (3) 94.4 0.0944 Adult retinal CTTTTCAGCA (7) 20.4 0.0204 ONL GCCATCCCGG (3) 32.6 0.0326 ONL CTTTTCAGCA (7) 19.2 0.0192