Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.269995	D6Ertd131e	DNA segment, Chr 6, ERATO Doi 131, expressed	6	6 60.95 cM	52478
Mm.269995	AI506767	expressed sequence AI506767	6		101120
Mm.269995	AW987477	expressed sequence AW987477	6		101403
Mm.269995	1700051K13Rik	RIKEN cDNA 1700051K13 gene	6		73352
Mm.269995	Etv6	ets variant gene 6 (TEL oncogene)	6	6 63.9 cM	14011
Gene Ontology	cell differentiation | cell growth and/or maintenance | DNA binding | intracellular | nucleus | protein binding | regulation of cell cycle | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	ETV6[ets variant gene 6 (TEL oncogene)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 36 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAATGAGCCT (8) 1.6 0.0016 P8 Cb GC TTGTTTTCCT (7) 1.6 0.0016 Cb medulloblastoma TTGTTTTCCT (7) 6.9 0.0069 Cb medulloblastoma GAATGAGCCT (8) 4.6 0.0046 P8 GC+1d culture GAATGAGCCT (8) 5.7 0.0057 P8 GC+1d culture TTGTTTTCCT (7) 2.3 0.0023 P8 GC+1d culture AATTTGAGAG (8) 1.1 0.0011 P8 GC+SHH+1d culture GAATGAGCCT (8) 4.7 0.0047 P8 GC+SHH+1d culture TTGTTTTCCT (7) 3.5 0.0035 P8 GC+SHH+1d culture AATTTGAGAG (8) 1.2 0.0012 Hypothalamus TTGTTTTCCT (7) 12.7 0.0127 Hypothalamus GAATGAGCCT (8) 1.8 0.0018 E12.5 retina AATTTGAGAG (8) 1.9 0.0019 E12.5 retina GAATGAGCCT (8) 1.9 0.0019 E14.5 retina TTGTTTTCCT (7) 5.5 0.0055 E14.5 retina GAATGAGCCT (8) 1.8 0.0018 E16.5 retina TTGTTTTCCT (7) 5.4 0.0054 E16.5 retina GAATGAGCCT (8) 3.6 0.0036 E18.5 retina GAATGAGCCT (8) 5.5 0.0055 P0.5 retina GAATGAGCCT (8) 5.9 0.0059 P0.5 retina TTGTTTTCCT (7) 2 0.002 P2.5 retina TTGTTTTCCT (7) 3.5 0.0035 P4.5 retina GAATGAGCCT (8) 4 0.004 P4.5 retina AATTTGAGAG (8) 2 0.002 P4.5 retina TTGTTTTCCT (7) 2 0.002 P6.5 retina TTGTTTTCCT (7) 5 0.005 P6.5 retina AATTTGAGAG (8) 1.7 0.0017 P10.5 crx- retina GAATGAGCCT (8) 9.3 0.0093 P10.5 crx- retina TTGTTTTCCT (7) 3.7 0.0037 P10.5 crx+ retina TTGTTTTCCT (7) 3.8 0.0038 P10.5 crx+ retina GAATGAGCCT (8) 1.9 0.0019 Adult retinal TTGTTTTCCT (7) 9.3 0.0093 Adult retinal GAATGAGCCT (8) 1.9 0.0019 ONL TTGTTTTCCT (7) 5.7 0.0057 ONL GAATGAGCCT (8) 3.8 0.0038 ONL AATTTGAGAG (8) 1.9 0.0019