Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.270259	A1300008O04Rik	RIKEN cDNA A1300008O04 gene	9		399640
Mm.270259	Sept7	septin 7	9		235072
Gene Ontology	cell cycle | GTP binding | protein binding | synaptosome
Human Homolog	CDC10[CDC10 cell division cycle 10 homolog (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 121 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC GCCTCTTGAA (3) 22.8 0.0228 P8 Cb GC ATTCCCATTT (7) 3.3 0.0033 P8 Cb GC ACAAAAATTA (2) 1.6 0.0016 P8 Cb GC AGCAAATGAA (2) 1.6 0.0016 P8 Cb GC ATTCCGAATT (107) 1.6 0.0016 P8 Cb GC TTCTGGTGGT (6) 1.6 0.0016 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma GCCTCTTGAA (3) 13.9 0.0139 Cb medulloblastoma AGAAAGTGAA (4) 2.3 0.0023 Cb medulloblastoma AGCAAATGAA (2) 2.3 0.0023 Cb medulloblastoma ATTCCCATTT (7) 2.3 0.0023 Cb medulloblastoma TAGCCAAAAT (2) 2.3 0.0023 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture GCCTCTTGAA (3) 10.3 0.0103 P8 GC+1d culture TTGGGAAACC (4) 3.4 0.0034 P8 GC+1d culture ACAAAAATTA (2) 1.1 0.0011 P8 GC+1d culture AGAAAGTGAA (4) 1.1 0.0011 P8 GC+1d culture ATTCCCATTT (7) 1.1 0.0011 P8 GC+1d culture CATTGAGTAT (4) 1.1 0.0011 P8 GC+1d culture GAAAAAAAAT (10) 1.1 0.0011 P8 GC+1d culture TAGCCAAAAT (2) 1.1 0.0011 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture GCCTCTTGAA (3) 17.6 0.0176 P8 GC+SHH+1d culture TTGGGAAACC (4) 4.7 0.0047 P8 GC+SHH+1d culture ACAAAAATTA (2) 1.2 0.0012 P8 GC+SHH+1d culture AGAAAGTGAA (4) 1.2 0.0012 P8 GC+SHH+1d culture TAGCCAAAAA (5) 1.2 0.0012 P8 GC+SHH+1d culture TGTGGTCTGT (3) 1.2 0.0012 P8 GC+SHH+1d culture TTCTGGTGGT (6) 1.2 0.0012 3T3 fibroblasts GCCTCTTGAA (3) 21 0.021 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts ATTCCCATTT (7) 3.5 0.0035 3T3 fibroblasts GCACCTGGGA (4) 3.5 0.0035 E15 cortex GCCTCTTGAA (3) 9.9 0.0099 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex GTAGCTCAAA (3) 4.9 0.0049 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex AGCAAATGAA (2) 4.5 0.0045 P1 cortex TTGGGAAACC (4) 4.5 0.0045 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus GCCTCTTGAA (3) 25.4 0.0254 Hypothalamus ACAAAAATTA (2) 5.4 0.0054 Hypothalamus AGCAAATGAA (2) 1.8 0.0018 Hypothalamus GAAAAAACAT (3) 1.8 0.0018 Hypothalamus GCACCTGGGA (4) 1.8 0.0018 Hypothalamus TAGCCAAAAT (2) 1.8 0.0018 Hypothalamus TTCTGGTGGT (6) 1.8 0.0018 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina GCCTCTTGAA (3) 18.8 0.0188 E12.5 retina AGAAAGTGAA (4) 3.8 0.0038 E12.5 retina AGCAAATGAA (2) 1.9 0.0019 E12.5 retina TAGCCAAAAA (5) 1.9 0.0019 E12.5 retina TGTGGTCTGT (3) 1.9 0.0019 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina GCCTCTTGAA (3) 9.1 0.0091 E14.5 retina GAAAAAAAAT (10) 3.6 0.0036 E14.5 retina TGTGGTCTGT (3) 3.6 0.0036 E14.5 retina AGAAAGTGAA (4) 1.8 0.0018 E14.5 retina ATTCCCATTT (7) 1.8 0.0018 E14.5 retina CATTGAGTAT (4) 1.8 0.0018 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina GCCTCTTGAA (3) 12.7 0.0127 E16.5 retina AGAAAGTGAA (4) 1.8 0.0018 E16.5 retina GAAAAAACAT (3) 1.8 0.0018 E16.5 retina TGTGGTCTGT (3) 1.8 0.0018 E16.5 retina TTGGGAAACC (4) 1.8 0.0018 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina GCCTCTTGAA (3) 14.6 0.0146 E18.5 retina ACAAAAATTA (2) 1.8 0.0018 E18.5 retina TTGGGAAACC (4) 1.8 0.0018 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina GCCTCTTGAA (3) 15.7 0.0157 P0.5 retina CAATGATATT (5) 3.9 0.0039 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina GCCTCTTGAA (3) 19.4 0.0194 P2.5 retina AGAAAGTGAA (4) 1.8 0.0018 P2.5 retina GTAGCTCAAA (3) 1.8 0.0018 P2.5 retina TAGCCAAAAT (2) 1.8 0.0018 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina GCCTCTTGAA (3) 21.8 0.0218 P4.5 retina ATTCCGAATT (107) 2 0.002 P4.5 retina CAATGATATT (5) 2 0.002 P4.5 retina GTAGCTCAAA (3) 2 0.002 P4.5 retina TGTGGTCTGT (3) 2 0.002 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina GCCTCTTGAA (3) 20 0.02 P6.5 retina TTGGGAAACC (4) 5 0.005 P6.5 retina ATTCCGAATT (107) 3.3 0.0033 P6.5 retina AGCAAATGAA (2) 1.7 0.0017 P6.5 retina CATTGAGTAT (4) 1.7 0.0017 P6.5 retina GAAAAAAAAT (10) 1.7 0.0017 P6.5 retina GAAAAAACAT (3) 1.7 0.0017 P6.5 retina TAGCCAAAAA (5) 1.7 0.0017 P10.5 crx- retina GCCTCTTGAA (3) 20.4 0.0204 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina TTGGGAAACC (4) 3.7 0.0037 P10.5 crx- retina ACAAAAATTA (2) 1.9 0.0019 P10.5 crx- retina GTAGCTCAAA (3) 1.9 0.0019 P10.5 crx- retina TGTGGTCTGT (3) 1.9 0.0019 P10.5 crx+ retina GCCTCTTGAA (3) 36.5 0.0365 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina TAGCCAAAAA (5) 3.8 0.0038 P10.5 crx+ retina ACAAAAATTA (2) 1.9 0.0019 P10.5 crx+ retina AGCAAATGAA (2) 1.9 0.0019 P10.5 crx+ retina GCACCTGGGA (4) 1.9 0.0019 P10.5 crx+ retina GTAGCTCAAA (3) 1.9 0.0019 P10.5 crx+ retina TAGCCAAAAT (2) 1.9 0.0019 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal GCCTCTTGAA (3) 16.7 0.0167 Adult retinal AGAAAGTGAA (4) 3.7 0.0037 Adult retinal TTGGGAAACC (4) 1.9 0.0019 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL ATTCCGAATT (107) 3.8 0.0038 ONL GCCTCTTGAA (3) 3.8 0.0038 ONL ACAAAAATTA (2) 1.9 0.0019 ONL ATTCCCATTT (7) 1.9 0.0019 ONL GAAAAAACAT (3) 1.9 0.0019 ONL GTAGCTCAAA (3) 1.9 0.0019 ONL TTCTGGTGGT (6) 1.9 0.0019 ONL TTGGGAAACC (4) 1.9 0.0019