Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.270484	Mkrn1	makorin, ring finger protein, 1	6		54484
Gene Ontology	nucleic acid binding | protein ubiquitination | ubiquitin ligase complex | ubiquitin-protein ligase activity | zinc ion binding
Human Homolog	MKRN1[makorin, ring finger protein, 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC GAAGTGGTCT (2) 1.6 0.0016 P8 Cb GC GAGGTGCCGG (4) 1.6 0.0016 P8 Cb GC TTACAAAAAA (2) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GGGGGGGGGG (112) 6.9 0.0069 Cb medulloblastoma TTACAAAAAA (2) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture TGTCGGTAGA (2) 4.6 0.0046 P8 GC+1d culture GGGGGGGGGG (112) 2.3 0.0023 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture GGGGGGGGGG (112) 7 0.007 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture TGTCGGTAGA (2) 3.5 0.0035 P8 GC+SHH+1d culture TGTGGCCTGG (7) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts GGGGGGGGGG (112) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CTTTTTGAGG (3) 4.9 0.0049 E15 cortex GGGGGGGGGG (112) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex TGTCGGTAGA (2) 9.1 0.0091 P1 cortex TGTGGCCTGG (7) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus GAGGTGCCGG (4) 3.6 0.0036 Hypothalamus TGTCGGTAGA (2) 3.6 0.0036 Hypothalamus GAAGTGGTCT (2) 1.8 0.0018 Hypothalamus GGGGGGGGGG (112) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina TGTCGGTAGA (2) 3.6 0.0036 E14.5 retina GAGGTGCCGG (4) 1.8 0.0018 E14.5 retina TTACAAAAAA (2) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina CTTTTTGAGG (3) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina TGTCGGTAGA (2) 3.6 0.0036 E18.5 retina CTTTTTGAGG (3) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina TGTCGGTAGA (2) 5.9 0.0059 P0.5 retina TTACAAAAAA (2) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GGGGGGGGGG (112) 7 0.007 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina TGTCGGTAGA (2) 3.5 0.0035 P2.5 retina CTTTTTGAGG (3) 1.8 0.0018 P2.5 retina GAAGTGGTCT (2) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina GGGGGGGGGG (112) 9.9 0.0099 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina TGTCGGTAGA (2) 2 0.002 P4.5 retina TTACAAAAAA (2) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina TGTCGGTAGA (2) 5 0.005 P6.5 retina GGGGGGGGGG (112) 3.3 0.0033 P6.5 retina CTTTTTGAGG (3) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina CTTTTTGAGG (3) 7.4 0.0074 P10.5 crx- retina GAGGTGCCGG (4) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GGGGGGGGGG (112) 9.6 0.0096 P10.5 crx+ retina TGTGGCCTGG (7) 3.8 0.0038 P10.5 crx+ retina TTACAAAAAA (2) 3.8 0.0038 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina CTTTTTGAGG (3) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal GGGGGGGGGG (112) 3.7 0.0037 Adult retinal TGTCGGTAGA (2) 3.7 0.0037 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GCCTCCTTGT (4) 5.7 0.0057 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL GGGGGGGGGG (112) 1.9 0.0019